RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 VPS37BQ9H9H4 285 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SPATS2LQ9NUQ6 558 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 A0A087WWV3 80 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SPDYE3A6NKU9 549 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 BRD2P25440 801 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 RPL13P26373 211 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 SLC8A1P32418 973 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 TXKP42681 527 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 GYS2P54840 703 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 PPP2R5CQ13362 524 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 NELFCDQ8IXH7 590 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 MYO1AQ9UBC5 1043 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 FRMD4BQ9Y2L6 1034 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 JRKLQ9Y4A0 524 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 HARSP12081 509 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 HNRNPH2P55795 449 aaKnown RBP8.47□□□□□ -1.05
CTNND1-223ENST00000529986 MAP7Q14244 749 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 LONRF2Q1L5Z9 754 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 VWA3BQ502W6 1294 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 TCP11Q8WWU5 503 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 PPP1R13BQ96KQ4 1090 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 NUP58Q9BVL2 599 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 KLHL14Q9P2G3 628 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 TACC3Q9Y6A5 838 aa8.47□□□□□ -1.05
CTNND1-223ENST00000529986 CCNT1O60563 726 aaKnown RBP8.46□□□□□ -1.05
CTNND1-223ENST00000529986 MBD4O95243 580 aa8.46□□□□□ -1.05
CTNND1-223ENST00000529986 GAS8O95995 478 aa8.46□□□□□ -1.05
CTNND1-223ENST00000529986 CNNM4Q6P4Q7 775 aa8.46□□□□□ -1.05
CTNND1-223ENST00000529986 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.05
CTNND1-223ENST00000529986 NPATQ14207 1427 aa8.46□□□□□ -1.05
CTNND1-223ENST00000529986 ABCA8O94911 1581 aa8.46□□□□□ -1.05
CTNND1-223ENST00000529986 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
CTNND1-223ENST00000529986 SBNO1A3KN83 1393 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 KCNK3O14649 394 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 ENC1O14682 589 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 PLCD1P51178 756 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 ITIH3Q06033 890 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 BIRC3Q13489 604 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 TEX11Q8IYF3 940 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 KIAA1468Q9P260 1216 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 I3L4J1 428 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 PER1O15534 1290 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-223ENST00000529986 COBLO75128 1261 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 IFNAR2P48551 515 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 CEBPAP49715 358 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-223ENST00000529986 VPS41P49754 854 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 KRT40Q6A162 431 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.46□□□□□ -1.06
CTNND1-223ENST00000529986 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 LRRD1A4D1F6 860 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 CHMP2AO43633 222 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 CRCPO75575 148 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 SH2D4BQ5SQS7 431 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 CSRNP2Q9H175 543 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 SUDS3Q9H7L9 328 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-223ENST00000529986 FANCLQ9NW38 375 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
CTNND1-223ENST00000529986 PFKFB1P16118 471 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 GNA11P29992 359 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 EIF4A2Q14240 407 aaKnown RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC152Q4G0S7 254 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 TTC38Q5R3I4 469 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 MAEAQ7L5Y9 396 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 RAB3IPQ96QF0 476 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 LLPHQ9BRT6 129 aaKnown RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 TSPYL2Q9H2G4 693 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 DEXIO95424 95 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 RBBP5Q15291 538 aaKnown RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 LINS1Q8NG48 757 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 WHAMMQ8TF30 809 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 TRPM2O94759 1503 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 PRDM1O75626 825 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC14Q49A88 953 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 SFMBT2Q5VUG0 894 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 PHLDB3Q6NSJ2 640 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 ANKRD13CQ8N6S4 541 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 CFAP61Q8NHU2 1237 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 N4BP2L2Q92802 583 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 ABTB1Q969K4 478 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 KIFC2Q96AC6 838 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 MED4Q9NPJ6 270 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 FAF1Q9UNN5 650 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 PNMA6EA0A0J9YXQ4 647 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 SH3BP5O60239 455 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 ABCB4P21439 1286 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 RASSF2P50749 326 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 USP28Q96RU2 1077 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 BLMP54132 1417 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-223ENST00000529986 KRIT1O00522 736 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 GSTO1P78417 241 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 ADCY1Q08828 1119 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 CCDC13Q8IYE1 715 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 CCT6BQ92526 530 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 HELLSQ9NRZ9 838 aa8.45□□□□□ -1.06
CTNND1-223ENST00000529986 GSPT1P15170 499 aaKnown RBP8.44□□□□□ -1.06
CTNND1-223ENST00000529986 MAN1A1P33908 653 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms