RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 CRACR2BQ8N4Y2 399 aaPredicted RBP18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 PROCA1Q8NCQ7 364 aaPredicted RBP18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 MAFAQ8NHW3 353 aaPredicted RBP18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 RIOK1Q9BRS2 568 aaKnown RBP18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 LAMA2P24043 3122 aaKnown RBP18.12■□□□□ 0.49
AP002884.3-204ENST00000529938 CYP2B6P20813 491 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 JAG1P78504 1218 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 SPP2Q13103 211 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 CERS3Q8IU89 383 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 HAUS7Q99871 368 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 LBHD1Q9BQE6 289 aaPredicted RBP18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 PHIPQ8WWQ0 1821 aa18.11■□□□□ 0.49
AP002884.3-204ENST00000529938 TCRBV5S4A2TA0A5A2 114 aa18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 CHGBP05060 677 aa18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 COL9A1P20849 921 aa18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 SHROOM1Q2M3G4 852 aaPredicted RBP18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 TMED8Q6PL24 325 aaPredicted RBP18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 METTL16Q86W50 562 aaKnown RBP18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 SYMPKQ92797 1274 aaKnown RBP18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 SEMA6BQ9H3T3 888 aa18.1■□□□□ 0.49
AP002884.3-204ENST00000529938 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 USP17L5A8MUK1 530 aa18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 GDF11O95390 407 aa18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 TSHZ3Q63HK5 1081 aa18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 LHX8Q68G74 356 aa18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 ZNF280CQ8ND82 737 aa18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 ASCC2Q9H1I8 757 aaPredicted RBP18.09■□□□□ 0.49
AP002884.3-204ENST00000529938 PLXNB2O15031 1838 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 ADD2P35612 726 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 CACNB2Q08289 660 aaPredicted RBP18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 PABPC4Q13310 644 aaKnown RBP eCLIP18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 LCORLQ8N3X6 602 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 NUDT12Q9BQG2 462 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 ARMT1Q9H993 441 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 ECHDC1Q9NTX5 307 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 MORF4L1Q9UBU8 362 aa18.08■□□□□ 0.48
AP002884.3-204ENST00000529938 DOCK1Q14185 1865 aa18.07■□□□□ 0.48
AP002884.3-204ENST00000529938 PLCD1P51178 756 aa18.07■□□□□ 0.48
AP002884.3-204ENST00000529938 TRMT44Q8IYL2 757 aaKnown RBP18.07■□□□□ 0.48
AP002884.3-204ENST00000529938 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
AP002884.3-204ENST00000529938 CRNKL1Q9BZJ0 848 aaKnown RBP18.07■□□□□ 0.48
AP002884.3-204ENST00000529938 POLR3DP05423 398 aaPredicted RBP18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 ASNSP08243 561 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 HMGCS2P54868 508 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 EVX2Q03828 476 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 SOCS4Q8WXH5 440 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 AS3MTQ9HBK9 375 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 SERPINB13Q9UIV8 391 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 SIPA1L1O43166 1804 aa18.06■□□□□ 0.48
AP002884.3-204ENST00000529938 CDK5RAP2Q96SN8 1893 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 PRKAB2O43741 272 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 MBD4O95243 580 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 CCND3P30281 292 aaPredicted RBP18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 MYLIPQ8WY64 445 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 TBC1D2Q9BYX2 928 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 MCM9Q9NXL9 1143 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 ZBTB21Q9ULJ3 1066 aa18.05■□□□□ 0.48
AP002884.3-204ENST00000529938 GH2P01242 217 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 ZKSCAN1P17029 563 aaPredicted RBP18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 MTMR2Q13614 643 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 UBE3CQ15386 1083 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 SH3D19Q5HYK7 790 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 TATDN1Q6P1N9 297 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 OTUD7AQ8TE49 926 aaPredicted RBP18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 GPATCH3Q96I76 525 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 WDR18Q9BV38 432 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 SENP6Q9GZR1 1112 aaPredicted RBP18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 EHD4Q9H223 541 aa18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 DCP1AQ9NPI6 582 aaPredicted RBP18.04■□□□□ 0.48
AP002884.3-204ENST00000529938 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 CYP2D6P10635 497 aa18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 BACE1P56817 501 aa18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 SHHQ15465 462 aa18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 USP6NLQ92738 828 aa18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 TTYH1Q9H313 450 aaPredicted RBP18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 MUC3AQ02505 3323 aa18.03■□□□□ 0.48
AP002884.3-204ENST00000529938 LOC285556D6RIA3 1793 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 SHMT1P34896 483 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 CCL14Q16627 93 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 ZSCAN25Q6NSZ9 544 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 GPRC5AQ8NFJ5 357 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 P2RX7Q99572 595 aaKnown RBP18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 PUS7LQ9H0K6 701 aaKnown RBP18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 GINM1Q9NU53 330 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 PRKAG2Q9UGJ0 569 aa18.02■□□□□ 0.48
AP002884.3-204ENST00000529938 CDH23Q9H251 3354 aa18.02■□□□□ 0.47
AP002884.3-204ENST00000529938 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
AP002884.3-204ENST00000529938 TNFRSF10AO00220 468 aa18.01■□□□□ 0.47
AP002884.3-204ENST00000529938 PEX10O60683 326 aa18.01■□□□□ 0.47
AP002884.3-204ENST00000529938 FOSL2P15408 326 aa18.01■□□□□ 0.47
AP002884.3-204ENST00000529938 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
AP002884.3-204ENST00000529938 SMAD3P84022 425 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms