RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 IFIT2P09913 472 aaKnown RBP14.73□□□□□ -0.05
USH1C-208ENST00000529563 TMED8Q6PL24 325 aaPredicted RBP14.73□□□□□ -0.05
USH1C-208ENST00000529563 DNAJC2Q99543 621 aaKnown RBP14.73□□□□□ -0.05
USH1C-208ENST00000529563 CRNKL1Q9BZJ0 848 aaKnown RBP14.73□□□□□ -0.05
USH1C-208ENST00000529563 ANTXR1Q9H6X2 564 aa14.73□□□□□ -0.05
USH1C-208ENST00000529563 IL1RAPL2Q9NP60 686 aa14.73□□□□□ -0.05
USH1C-208ENST00000529563 EMILIN3Q9NT22 766 aa14.73□□□□□ -0.05
USH1C-208ENST00000529563 RBPJLQ9UBG7 517 aa14.73□□□□□ -0.05
USH1C-208ENST00000529563 IVNS1ABPQ9Y6Y0 642 aa14.73□□□□□ -0.05
USH1C-208ENST00000529563 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
USH1C-208ENST00000529563 CDK5RAP2Q96SN8 1893 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 A0A1W2PPC1 479 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 HMMRO75330 724 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 XRCC5P13010 732 aaKnown RBP14.72□□□□□ -0.05
USH1C-208ENST00000529563 Q3C1V9 767 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 CLASRPQ8N2M8 674 aaKnown RBP14.72□□□□□ -0.05
USH1C-208ENST00000529563 PANK1Q8TE04 598 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 APBA2Q99767 749 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 EHD4Q9H223 541 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 PORCNQ9H237 461 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
USH1C-208ENST00000529563 RABGAP1Q9Y3P9 1069 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 MYH1P12882 1939 aa14.72□□□□□ -0.05
USH1C-208ENST00000529563 MYO5AQ9Y4I1 1855 aaKnown RBP14.72□□□□□ -0.05
USH1C-208ENST00000529563 CACNB2Q08289 660 aaPredicted RBP14.71□□□□□ -0.05
USH1C-208ENST00000529563 SLC9C2Q5TAH2 1124 aa14.71□□□□□ -0.05
USH1C-208ENST00000529563 MFSD14CQ5VZR4 134 aa14.71□□□□□ -0.05
USH1C-208ENST00000529563 TATDN1Q6P1N9 297 aa14.71□□□□□ -0.05
USH1C-208ENST00000529563 MCM9Q9NXL9 1143 aa14.71□□□□□ -0.05
USH1C-208ENST00000529563 SYN1P17600 705 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 VCAM1P19320 739 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 CNGA1P29973 690 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 ATP2B2Q01814 1243 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 RHPN1Q8TCX5 695 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
USH1C-208ENST00000529563 KIAA1683Q9H0B3 1180 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 OGDHLQ9ULD0 1010 aa14.7□□□□□ -0.06
USH1C-208ENST00000529563 GOLIM4O00461 696 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 PDE6AP16499 860 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 CCND3P30281 292 aaPredicted RBP14.69□□□□□ -0.06
USH1C-208ENST00000529563 PLCD1P51178 756 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 MAP2K5Q13163 448 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 CCL14Q16627 93 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 MORN1Q5T089 497 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 CATSPERGQ6ZRH7 1159 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 AMOTL1Q8IY63 956 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 ACER1Q8TDN7 264 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 C12orf42Q96LP6 360 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
USH1C-208ENST00000529563 RPAP3Q9H6T3 665 aaPredicted RBP14.69□□□□□ -0.06
USH1C-208ENST00000529563 ZNF532Q9HCE3 1301 aa14.68□□□□□ -0.06
USH1C-208ENST00000529563 MAP3K21Q5TCX8 1036 aa14.68□□□□□ -0.06
USH1C-208ENST00000529563 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
USH1C-208ENST00000529563 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
USH1C-208ENST00000529563 RIOK1Q9BRS2 568 aaKnown RBP14.68□□□□□ -0.06
USH1C-208ENST00000529563 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
USH1C-208ENST00000529563 DDX60LQ5H9U9 1706 aaKnown RBP14.68□□□□□ -0.06
USH1C-208ENST00000529563 SLC15A5A6NIM6 579 aa14.67□□□□□ -0.06
USH1C-208ENST00000529563 SHMT1P34896 483 aa14.67□□□□□ -0.06
USH1C-208ENST00000529563 PLS1Q14651 629 aa14.67□□□□□ -0.06
USH1C-208ENST00000529563 SEPT2Q15019 361 aa14.67□□□□□ -0.06
USH1C-208ENST00000529563 DPP9Q86TI2 863 aa14.67□□□□□ -0.06
USH1C-208ENST00000529563 UBE2OQ9C0C9 1292 aaKnown RBP14.67□□□□□ -0.06
USH1C-208ENST00000529563 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.67□□□□□ -0.06
USH1C-208ENST00000529563 DDX19BQ9UMR2 479 aa14.67□□□□□ -0.06
USH1C-208ENST00000529563 PLXNB2O15031 1838 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 PTPREP23469 700 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 MAGEA10P43363 369 aaPredicted RBP14.66□□□□□ -0.06
USH1C-208ENST00000529563 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
USH1C-208ENST00000529563 SDR42E1Q8WUS8 393 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 USP6NLQ92738 828 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 LRCH3Q96II8 777 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 SH2D4AQ9H788 454 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 ARHGEF10LQ9HCE6 1279 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
USH1C-208ENST00000529563 NAV1Q8NEY1 1877 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 SPDYE16A6NNV3 312 aaPredicted RBP14.65□□□□□ -0.06
USH1C-208ENST00000529563 RAD21O60216 631 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 CNMDO75829 334 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
USH1C-208ENST00000529563 BMP8BP34820 402 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 COG2Q14746 738 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 TMEM179Q6ZVK1 233 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.65□□□□□ -0.06
USH1C-208ENST00000529563 GDF15Q99988 308 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 SENP6Q9GZR1 1112 aaPredicted RBP14.65□□□□□ -0.06
USH1C-208ENST00000529563 ARMT1Q9H993 441 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 PAG1Q9NWQ8 432 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 BTBD7Q9P203 1132 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 PRKAG2Q9UGJ0 569 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 SWAP70Q9UH65 585 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 COG6Q9Y2V7 657 aa14.65□□□□□ -0.06
USH1C-208ENST00000529563 SOX1O00570 391 aaPredicted RBP14.64□□□□□ -0.07
USH1C-208ENST00000529563 MSCO60682 206 aa14.64□□□□□ -0.07
USH1C-208ENST00000529563 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms