RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 POTEMA6NI47 508 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 SRGAP3O43295 1099 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 ERVK-24P63145 666 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 CCNA1P78396 465 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 RRP1BQ14684 758 aaKnown RBP11.06□□□□□ -0.64
VPS11-203ENST00000529545 MFSD14CQ5VZR4 134 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 GPR142Q7Z601 462 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 APBA2Q99767 749 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 RBPJLQ9UBG7 517 aa11.06□□□□□ -0.64
VPS11-203ENST00000529545 MSCO60682 206 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 GNAI3P08754 354 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 UQCRFS1P1P0C7P4 283 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
VPS11-203ENST00000529545 CCL14Q16627 93 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 MORN1Q5T089 497 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 WDR78Q5VTH9 848 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 NAA16Q6N069 864 aaPredicted RBP11.05□□□□□ -0.64
VPS11-203ENST00000529545 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 ATF7IPQ6VMQ6 1270 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
VPS11-203ENST00000529545 ZNF384Q8TF68 577 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 USP6NLQ92738 828 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
VPS11-203ENST00000529545 SENP6Q9GZR1 1112 aaPredicted RBP11.05□□□□□ -0.64
VPS11-203ENST00000529545 TXNRD2Q9NNW7 524 aa11.05□□□□□ -0.64
VPS11-203ENST00000529545 PEX10O60683 326 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 HLA-DOAP06340 250 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 CNGA1P29973 690 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 Q3C1V9 767 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 PI16Q6UXB8 463 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 FAM161BQ96MY7 647 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 MEIS3Q99687 375 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 FEZ1Q99689 392 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 PORCNQ9H237 461 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 AATFQ9NY61 560 aaKnown RBP eCLIP11.04□□□□□ -0.64
VPS11-203ENST00000529545 NOB1Q9ULX3 412 aaKnown RBP11.04□□□□□ -0.64
VPS11-203ENST00000529545 RABGAP1Q9Y3P9 1069 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 IVNS1ABPQ9Y6Y0 642 aa11.04□□□□□ -0.64
VPS11-203ENST00000529545 LAMA3Q16787 3333 aa11.03□□□□□ -0.64
VPS11-203ENST00000529545 GDF11O95390 407 aa11.03□□□□□ -0.64
VPS11-203ENST00000529545 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
VPS11-203ENST00000529545 ARID4AP29374 1257 aaPredicted RBP11.03□□□□□ -0.64
VPS11-203ENST00000529545 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
VPS11-203ENST00000529545 G3BP1Q13283 466 aaKnown RBP eCLIP11.03□□□□□ -0.64
VPS11-203ENST00000529545 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
VPS11-203ENST00000529545 MAPKAPK5Q8IW41 473 aa11.03□□□□□ -0.64
VPS11-203ENST00000529545 GUCD1Q96NT3 240 aa11.03□□□□□ -0.64
VPS11-203ENST00000529545 DDX20Q9UHI6 824 aaKnown RBP11.03□□□□□ -0.64
VPS11-203ENST00000529545 ZBTB21Q9ULJ3 1066 aa11.03□□□□□ -0.64
VPS11-203ENST00000529545 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L15C9J2P7 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L11C9JVI0 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L18D6R9N7 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L22D6RA61 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L19D6RCP7 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L20D6RJB6 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 DNM1LO00429 736 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 MCAMP43121 646 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP14P54578 494 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 PPP4CP60510 307 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 USP17L24Q0WX57 530 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 METTL16Q86W50 562 aaKnown RBP11.02□□□□□ -0.65
VPS11-203ENST00000529545 ARRDC4Q8NCT1 418 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 LPAR1Q92633 364 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 EMILIN3Q9NT22 766 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 PALD1Q9ULE6 856 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 FLT1P17948 1338 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.65
VPS11-203ENST00000529545 IGSF3O75054 1194 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 PTPREP23469 700 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 RTP1P59025 263 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 JAG1P78504 1218 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 MTX1Q13505 466 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 CCDC158Q5M9N0 1113 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 TTC39AQ5SRH9 613 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 HS6ST3Q8IZP7 471 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 MFRPQ9BY79 579 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 SAP30BPQ9UHR5 308 aaKnown RBP11.01□□□□□ -0.65
VPS11-203ENST00000529545 ATP11BQ9Y2G3 1177 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 NDUFB9Q9Y6M9 179 aa11.01□□□□□ -0.65
VPS11-203ENST00000529545 MAST2Q6P0Q8 1798 aa11□□□□□ -0.65
VPS11-203ENST00000529545 SIPA1L1O43166 1804 aa11□□□□□ -0.65
VPS11-203ENST00000529545 KBTBD13C9JR72 458 aa11□□□□□ -0.65
VPS11-203ENST00000529545 GH2P01242 217 aa11□□□□□ -0.65
VPS11-203ENST00000529545 ZYXQ15942 572 aaKnown RBP11□□□□□ -0.65
VPS11-203ENST00000529545 DPP9Q86TI2 863 aa11□□□□□ -0.65
VPS11-203ENST00000529545 MAFAQ8NHW3 353 aaPredicted RBP11□□□□□ -0.65
VPS11-203ENST00000529545 C12orf42Q96LP6 360 aa11□□□□□ -0.65
VPS11-203ENST00000529545 CDX2Q99626 313 aaPredicted RBP11□□□□□ -0.65
VPS11-203ENST00000529545 DNAJC18Q9H819 358 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms