RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TEX11Q8IYF3 940 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 ADAMTS19Q8TE59 1207 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 TGFBRAP1Q8WUH2 860 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 EVI5LQ96CN4 794 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 KLRG1Q96E93 195 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 PUS7LQ9H0K6 701 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 FAM217BQ9NTX9 383 aaPredicted RBP7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 MKRN1Q9UHC7 482 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 ANGEL1Q9UNK9 670 aaKnown RBP7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 FZD1Q9UP38 647 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 CEP350Q5VT06 3117 aa7.52□□□□□ -1.21
ATPAF1-209ENST00000529214 ECM29Q5VYK3 1845 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 RNF113AO15541 343 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 VEGFBP49765 207 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 LRRFIP1Q32MZ4 808 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 RGMBQ6NW40 437 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 DNAJC14Q6Y2X3 702 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 MIGA2Q7L4E1 593 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 ZSCAN29Q8IWY8 852 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 OSBP2Q969R2 916 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 HOOK2Q96ED9 719 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 OSBPL5Q9H0X9 879 aaPredicted RBP7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 RFX7Q2KHR2 1363 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 TRPM7Q96QT4 1865 aa7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 MYO5AQ9Y4I1 1855 aaKnown RBP7.51□□□□□ -1.21
ATPAF1-209ENST00000529214 RRP9O43818 475 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 ECE1P42892 770 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 USP5P45974 858 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 IREB2P48200 963 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 MAP3K9P80192 1104 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 DCAF15Q66K64 600 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 CYP4F22Q6NT55 531 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 FOXP4Q8IVH2 680 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 MAPKAPK5Q8IW41 473 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 APPBP2Q92624 585 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 CSRNP1Q96S65 589 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 STRBPQ96SI9 672 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 FSD1Q9BTV5 496 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 DHX36Q9H2U1 1008 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 ARMT1Q9H993 441 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 PI4KBQ9UBF8 816 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 ZNF112Q9UJU3 913 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 WDR33Q9C0J8 1336 aaKnown RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 ATRNL1Q5VV63 1379 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 RPAP1Q9BWH6 1393 aaPredicted RBP7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
ATPAF1-209ENST00000529214 PHF20L1A8MW92 1017 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 FAM155AB1AL88 458 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 PRKAB2O43741 272 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 MBD4O95243 580 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 ATG7O95352 703 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 FLT1P17948 1338 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 MAP2K2P36507 400 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 ZMYM1Q5SVZ6 1142 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 METTL16Q86W50 562 aaKnown RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 JMYQ8N9B5 988 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 UBXN4Q92575 508 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 DOCK2Q92608 1830 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 RILPL2Q969X0 211 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 AIDAQ96BJ3 306 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 SLC10A4Q96EP9 437 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 CAPNS2Q96L46 248 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 PHOX2BQ99453 314 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 ZNF341Q9BYN7 854 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 CRNKL1Q9BZJ0 848 aaKnown RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 ATP8A2Q9NTI2 1148 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 PPP4R2Q9NY27 417 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 PALD1Q9ULE6 856 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 SLURP2P0DP57 97 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 SDSP20132 328 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 NOGQ13253 232 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 AXDND1Q5T1B0 1012 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 TTC22Q5TAA0 569 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 TTC6Q86TZ1 520 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 EXOC8Q8IYI6 725 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 SDR42E1Q8WUS8 393 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 ZKSCAN4Q969J2 545 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 CLMNQ96JQ2 1002 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 SEC62Q99442 399 aaKnown RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 TBC1D2Q9BYX2 928 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 DCP1AQ9NPI6 582 aaPredicted RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 HELLSQ9NRZ9 838 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 HERC5Q9UII4 1024 aaKnown RBP7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 SLC4A4Q9Y6R1 1079 aa7.49□□□□□ -1.21
ATPAF1-209ENST00000529214 COL2A1P02458 1487 aaPredicted RBP7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 GSG1L2A8MUP6 293 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 M0R2C6 588 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 GPAA1O43292 621 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 AOC2O75106 756 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 HLA-DOAP06340 250 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 SLC10A3P09131 477 aa7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 GSPT1P15170 499 aaKnown RBP7.48□□□□□ -1.21
ATPAF1-209ENST00000529214 GNAT2P19087 354 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms