RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-217ENST00000529133 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 TLL2Q9Y6L7 1015 aa13.49□□□□□ -0.25
CAPN1-217ENST00000529133 TNKSO95271 1327 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 SPDYE5A6NIY4 337 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 NOVP48745 357 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 APLP1P51693 650 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
CAPN1-217ENST00000529133 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 SIAH1Q8IUQ4 282 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 LRRC2Q9BYS8 371 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-217ENST00000529133 MTMR4Q9NYA4 1195 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 MYH8P13535 1937 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 ATAD5Q96QE3 1844 aa13.48□□□□□ -0.25
CAPN1-217ENST00000529133 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-217ENST00000529133 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
CAPN1-217ENST00000529133 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
CAPN1-217ENST00000529133 SEC23AQ15436 765 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 RCSD1Q6JBY9 416 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 ERO1BQ86YB8 467 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
CAPN1-217ENST00000529133 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 SLC10A4Q96EP9 437 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 NYAP2Q9P242 653 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 ABT1Q9ULW3 272 aaKnown RBP13.47□□□□□ -0.25
CAPN1-217ENST00000529133 ZHX2Q9Y6X8 837 aa13.47□□□□□ -0.25
CAPN1-217ENST00000529133 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 TTLL1O95922 423 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 GJA5P36382 358 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 PPATQ06203 517 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
CAPN1-217ENST00000529133 RABEP1Q15276 862 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 PPP4R3BQ5MIZ7 849 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 DGKHQ86XP1 1220 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 ANKS1AQ92625 1134 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 OPTNQ96CV9 577 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 OTUD5Q96G74 571 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 WNK4Q96J92 1243 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 WDR18Q9BV38 432 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 AS3MTQ9HBK9 375 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 SENP2Q9HC62 589 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 PDRG1Q9NUG6 133 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 STX8Q9UNK0 236 aa13.46□□□□□ -0.25
CAPN1-217ENST00000529133 ERICH2A1L162 156 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
CAPN1-217ENST00000529133 ECE1P42892 770 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 NEK4P51957 841 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 PPIL2Q13356 520 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 WTAPQ15007 396 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 RGMBQ6NW40 437 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 Q6ZUG5 572 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 LRRC47Q8N1G4 583 aaKnown RBP13.45□□□□□ -0.26
CAPN1-217ENST00000529133 ZNF280CQ8ND82 737 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 HHIPL1Q96JK4 782 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 TTC14Q96N46 770 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 ARHGEF10LQ9HCE6 1279 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
CAPN1-217ENST00000529133 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 LIFRP42702 1097 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 ZNF157P51786 506 aaPredicted RBP13.44□□□□□ -0.26
CAPN1-217ENST00000529133 SPP2Q13103 211 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 MTMR2Q13614 643 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
CAPN1-217ENST00000529133 FBXL16Q8N461 479 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 MKL1Q969V6 931 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 FEZ1Q99689 392 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 KIAA1683Q9H0B3 1180 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 SYNPO2Q9UMS6 1093 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 KCNH4Q9UQ05 1017 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 TMX2Q9Y320 296 aa13.44□□□□□ -0.26
CAPN1-217ENST00000529133 PHIPQ8WWQ0 1821 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 IRF6O14896 467 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 SLC10A3P09131 477 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 FGD1P98174 961 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-217ENST00000529133 SPRYD7Q5W111 196 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 BRF1Q92994 677 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-217ENST00000529133 KAT14Q9H8E8 782 aa13.43□□□□□ -0.26
CAPN1-217ENST00000529133 USP17L10C9JJH3 530 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms