RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 EMILIN3Q9NT22 766 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 RBM27Q9P2N5 1060 aaKnown RBP18.96■□□□□ 0.63
CTSB-215ENST00000528965 DDX19BQ9UMR2 479 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 A0A1W2PPC1 479 aa18.95■□□□□ 0.62
CTSB-215ENST00000528965 POLR3DP05423 398 aaPredicted RBP18.95■□□□□ 0.62
CTSB-215ENST00000528965 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
CTSB-215ENST00000528965 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
CTSB-215ENST00000528965 APBA2Q99767 749 aa18.95■□□□□ 0.62
CTSB-215ENST00000528965 RIOK1Q9BRS2 568 aaKnown RBP18.95■□□□□ 0.62
CTSB-215ENST00000528965 NBPF3Q9H094 633 aa18.95■□□□□ 0.62
CTSB-215ENST00000528965 KIAA1683Q9H0B3 1180 aa18.95■□□□□ 0.62
CTSB-215ENST00000528965 RBPJLQ9UBG7 517 aa18.95■□□□□ 0.62
CTSB-215ENST00000528965 RABGAP1Q9Y3P9 1069 aa18.95■□□□□ 0.62
CTSB-215ENST00000528965 PRKAR2AP13861 404 aaKnown RBP18.94■□□□□ 0.62
CTSB-215ENST00000528965 PDE6AP16499 860 aa18.94■□□□□ 0.62
CTSB-215ENST00000528965 SLC9C2Q5TAH2 1124 aa18.94■□□□□ 0.62
CTSB-215ENST00000528965 MAP3K21Q5TCX8 1036 aa18.94■□□□□ 0.62
CTSB-215ENST00000528965 GPR142Q7Z601 462 aa18.94■□□□□ 0.62
CTSB-215ENST00000528965 PLEKHH3Q7Z736 793 aa18.94■□□□□ 0.62
CTSB-215ENST00000528965 DNAJC2Q99543 621 aaKnown RBP18.94■□□□□ 0.62
CTSB-215ENST00000528965 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
CTSB-215ENST00000528965 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
CTSB-215ENST00000528965 VCAM1P19320 739 aa18.93■□□□□ 0.62
CTSB-215ENST00000528965 TRIM32Q13049 653 aa18.93■□□□□ 0.62
CTSB-215ENST00000528965 DIS3LQ8TF46 1054 aaKnown RBP18.93■□□□□ 0.62
CTSB-215ENST00000528965 APBB1O00213 710 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 GOLIM4O00461 696 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 RAB11FIP3O75154 756 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 PORCNQ9H237 461 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 PRO3102Q9H379 93 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 MCM9Q9NXL9 1143 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 OGDHLQ9ULD0 1010 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 PLXNB2O15031 1838 aa18.92■□□□□ 0.62
CTSB-215ENST00000528965 SHMT1P34896 483 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 MORN1Q5T089 497 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 WDR78Q5VTH9 848 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 LBX2Q6XYB7 198 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 IVNS1ABPQ9Y6Y0 642 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 ZNF532Q9HCE3 1301 aa18.91■□□□□ 0.62
CTSB-215ENST00000528965 MPHOSPH10O00566 681 aaKnown RBP18.9■□□□□ 0.62
CTSB-215ENST00000528965 PEX10O60683 326 aa18.9■□□□□ 0.62
CTSB-215ENST00000528965 PLCD1P51178 756 aa18.9■□□□□ 0.62
CTSB-215ENST00000528965 Q3C1V9 767 aa18.9■□□□□ 0.62
CTSB-215ENST00000528965 CATSPERGQ6ZRH7 1159 aa18.9■□□□□ 0.62
CTSB-215ENST00000528965 AMOTL1Q8IY63 956 aa18.9■□□□□ 0.62
CTSB-215ENST00000528965 USP6NLQ92738 828 aa18.9■□□□□ 0.62
CTSB-215ENST00000528965 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.9■□□□□ 0.621e-6■□□□□ 10.8
CTSB-215ENST00000528965 GABPAQ06546 454 aa18.89■□□□□ 0.61
CTSB-215ENST00000528965 MAP2K5Q13163 448 aa18.89■□□□□ 0.61
CTSB-215ENST00000528965 MFSD14CQ5VZR4 134 aa18.89■□□□□ 0.61
CTSB-215ENST00000528965 C7orf61Q8IZ16 206 aa18.89■□□□□ 0.61
CTSB-215ENST00000528965 ACER1Q8TDN7 264 aa18.89■□□□□ 0.61
CTSB-215ENST00000528965 RPAP3Q9H6T3 665 aaPredicted RBP18.89■□□□□ 0.61
CTSB-215ENST00000528965 SWAP70Q9UH65 585 aa18.89■□□□□ 0.61
CTSB-215ENST00000528965 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 CACNB2Q08289 660 aaPredicted RBP18.88■□□□□ 0.61
CTSB-215ENST00000528965 TMEM179Q6ZVK1 233 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 DDRGK1Q96HY6 314 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 SH2D4AQ9H788 454 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 DCP1AQ9NPI6 582 aaPredicted RBP18.88■□□□□ 0.61
CTSB-215ENST00000528965 ZBTB40Q9NUA8 1239 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 PAG1Q9NWQ8 432 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 COG6Q9Y2V7 657 aa18.88■□□□□ 0.61
CTSB-215ENST00000528965 TCRBV5S4A2TA0A5A2 114 aa18.87■□□□□ 0.61
CTSB-215ENST00000528965 SPDYE16A6NNV3 312 aaPredicted RBP18.87■□□□□ 0.61
CTSB-215ENST00000528965 CNMDO75829 334 aa18.87■□□□□ 0.61
CTSB-215ENST00000528965 SEPT2Q15019 361 aa18.87■□□□□ 0.61
CTSB-215ENST00000528965 LCORLQ8N3X6 602 aa18.87■□□□□ 0.61
CTSB-215ENST00000528965 SDR42E1Q8WUS8 393 aa18.87■□□□□ 0.61
CTSB-215ENST00000528965 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
CTSB-215ENST00000528965 PTPREP23469 700 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 GUCY1A2P33402 732 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 CCL14Q16627 93 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 POTEEQ6S8J3 1075 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 TANGO6Q9C0B7 1094 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 ARHGEF10LQ9HCE6 1279 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 ATP8A2Q9NTI2 1148 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 HOXC10Q9NYD6 342 aa18.86■□□□□ 0.61
CTSB-215ENST00000528965 RANBP2P49792 3224 aaKnown RBP18.85■□□□□ 0.61
CTSB-215ENST00000528965 ALPK3Q96L96 1907 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 MSCO60682 206 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 MBD4O95243 580 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 ATP5JP18859 108 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 CCND3P30281 292 aaPredicted RBP18.85■□□□□ 0.61
CTSB-215ENST00000528965 MNX1P50219 401 aaPredicted RBP18.85■□□□□ 0.61
CTSB-215ENST00000528965 GRB14Q14449 540 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 LPAR1Q92633 364 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 ARMT1Q9H993 441 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 STAP2Q9UGK3 403 aa18.85■□□□□ 0.61
CTSB-215ENST00000528965 ZMYND8Q9ULU4 1186 aaPredicted RBP18.85■□□□□ 0.61
CTSB-215ENST00000528965 HOXC6P09630 235 aa18.84■□□□□ 0.61
CTSB-215ENST00000528965 BMP8BP34820 402 aa18.84■□□□□ 0.61
CTSB-215ENST00000528965 ADD2P35612 726 aa18.84■□□□□ 0.61
CTSB-215ENST00000528965 ATP2B2Q01814 1243 aa18.84■□□□□ 0.61
CTSB-215ENST00000528965 COG2Q14746 738 aa18.84■□□□□ 0.61
CTSB-215ENST00000528965 ZSCAN25Q6NSZ9 544 aa18.84■□□□□ 0.61
CTSB-215ENST00000528965 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms