RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 A0A0G2JMZ2 1700 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 TRIM27P14373 513 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-212ENST00000528930 TRIM32Q13049 653 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 TNFAIP1Q13829 316 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 ADGRE1Q14246 886 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 AAK1Q2M2I8 961 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 CFAP100Q494V2 611 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 TAF7LQ5H9L4 462 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.56□□□□□ -0.72
SSBP3-212ENST00000528930 KLHDC4Q8TBB5 520 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 KCNH4Q9UQ05 1017 aa10.56□□□□□ -0.72
SSBP3-212ENST00000528930 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-212ENST00000528930 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
SSBP3-212ENST00000528930 TFF2Q03403 129 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 PPATQ06203 517 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 LRRC24Q50LG9 513 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 ATF7IPQ6VMQ6 1270 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 NUDT18Q6ZVK8 323 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 CERS5Q8N5B7 392 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 MEIS3Q99687 375 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 CD209Q9NNX6 404 aa10.55□□□□□ -0.72
SSBP3-212ENST00000528930 PLIN1O60240 522 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 UBTFL1P0CB47 393 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-212ENST00000528930 CYP2C8P10632 490 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 KCNJ4P48050 445 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 UBE4AQ14139 1066 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 CCDC85BQ15834 202 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-212ENST00000528930 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 FRAT1Q92837 279 aaPredicted RBP10.54□□□□□ -0.72
SSBP3-212ENST00000528930 TIFAQ96CG3 184 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.54□□□□□ -0.72
SSBP3-212ENST00000528930 PRKAG2Q9UGJ0 569 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 LRRFIP2Q9Y608 721 aaKnown RBP10.54□□□□□ -0.72
SSBP3-212ENST00000528930 MROH5Q6ZUA9 1318 aa10.54□□□□□ -0.72
SSBP3-212ENST00000528930 SPDYE16A6NNV3 312 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-212ENST00000528930 KRT37O76014 449 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 IL1R1P14778 569 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 GTF2IP78347 998 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 ZKSCAN2Q63HK3 967 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
SSBP3-212ENST00000528930 COA7Q96BR5 231 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 RNPC3Q96LT9 517 aaKnown RBP10.53□□□□□ -0.72
SSBP3-212ENST00000528930 PHOX2BQ99453 314 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 PRDM12Q9H4Q4 367 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 CHD9Q3L8U1 2897 aa10.53□□□□□ -0.72
SSBP3-212ENST00000528930 DCHS1Q96JQ0 3298 aa10.52□□□□□ -0.72
SSBP3-212ENST00000528930 EPG5Q9HCE0 2579 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
SSBP3-212ENST00000528930 ERC2O15083 957 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 PDE8BO95263 885 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 ERMP1Q7Z2K6 904 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 TRIB2Q92519 343 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 BADQ92934 168 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 CLUAP1Q96AJ1 413 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
SSBP3-212ENST00000528930 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 BRWD1Q9NSI6 2320 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 LOC285556D6RIA3 1793 aa10.52□□□□□ -0.73
SSBP3-212ENST00000528930 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-212ENST00000528930 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-212ENST00000528930 EYA2O00167 538 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 TLL1O43897 1013 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 RTP1P59025 263 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 COPS2P61201 443 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 METTL24Q5JXM2 366 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 ZNF804AQ7Z570 1209 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 TMEM57Q8N5G2 664 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 TMEM39BQ9GZU3 492 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 ZNF70Q9UC06 446 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-212ENST00000528930 V9GY48 417 aaPredicted RBP10.51□□□□□ -0.73
SSBP3-212ENST00000528930 PLXNA3P51805 1871 aa10.51□□□□□ -0.73
SSBP3-212ENST00000528930 GNAI3P08754 354 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 FGFR2P21802 821 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 ITGB8P26012 769 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 HIBADHP31937 336 aaKnown RBP10.5□□□□□ -0.73
SSBP3-212ENST00000528930 GYG1P46976 350 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 MTX1Q13505 466 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 FBXO33Q7Z6M2 555 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 TDRD7Q8NHU6 1098 aaKnown RBP10.5□□□□□ -0.73
SSBP3-212ENST00000528930 COL26A1Q96A83 441 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 COPRSQ9NQ92 184 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 CHD7Q9P2D1 2997 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 GJD2Q9UKL4 321 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 HDAC5Q9UQL6 1122 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 C5orf42Q9H799 3197 aa10.5□□□□□ -0.73
SSBP3-212ENST00000528930 RPAP1Q9BWH6 1393 aaPredicted RBP10.5□□□□□ -0.73
SSBP3-212ENST00000528930 CIAO1O76071 339 aa10.49□□□□□ -0.73
SSBP3-212ENST00000528930 RLBP1P12271 317 aa10.49□□□□□ -0.73
SSBP3-212ENST00000528930 EPHB4P54760 987 aa10.49□□□□□ -0.73
SSBP3-212ENST00000528930 FKBP1AP62942 108 aaKnown RBP10.49□□□□□ -0.73
SSBP3-212ENST00000528930 E2F4Q16254 413 aa10.49□□□□□ -0.73
SSBP3-212ENST00000528930 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
SSBP3-212ENST00000528930 CD320Q9NPF0 282 aa10.49□□□□□ -0.73
SSBP3-212ENST00000528930 PA2G4Q9UQ80 394 aaKnown RBP10.49□□□□□ -0.73
SSBP3-212ENST00000528930 SLC45A1Q9Y2W3 748 aa10.49□□□□□ -0.73
SSBP3-212ENST00000528930 DOCK1Q14185 1865 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 1632.6 ms