RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 FOCADQ5VW36 1801 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 MYPNQ86TC9 1320 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 CDK5RAP2Q96SN8 1893 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 SIPA1L1O43166 1804 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 PATL2C9JE40 543 aaKnown RBP17.1■□□□□ 0.33
CAPN1-216ENST00000528739 RAD21O60216 631 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 CTGFP29279 349 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 TMEM179Q6ZVK1 233 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 COA7Q96BR5 231 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
CAPN1-216ENST00000528739 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
CAPN1-216ENST00000528739 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 SMIM22K7EJ46 135 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 AKR1B1P15121 316 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 HOXA7P31268 230 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-216ENST00000528739 C16orf86Q6ZW13 317 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 CCDC17Q96LX7 622 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 PAGR1Q9BTK6 254 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 ARHGEF10LQ9HCE6 1279 aa17.09■□□□□ 0.33
CAPN1-216ENST00000528739 NAV1Q8NEY1 1877 aa17.08■□□□□ 0.33
CAPN1-216ENST00000528739 ATAD5Q96QE3 1844 aa17.08■□□□□ 0.33
CAPN1-216ENST00000528739 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L15C9J2P7 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L13C9JLJ4 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L11C9JVI0 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L18D6R9N7 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L22D6RA61 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L17D6RBQ6 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L19D6RCP7 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L20D6RJB6 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 HERVK_113P62684 666 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 ICA1Q05084 483 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 PRKCZQ05513 592 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 USP17L24Q0WX57 530 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 ZMYM1Q5SVZ6 1142 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 GIMAP6Q6P9H5 292 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-216ENST00000528739 KIAA1683Q9H0B3 1180 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 NAPBQ9H115 298 aa17.08■□□□□ 0.32
CAPN1-216ENST00000528739 PHIPQ8WWQ0 1821 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 NUCB1Q02818 461 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 SBK1Q52WX2 424 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 IFNL3Q8IZI9 196 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-216ENST00000528739 GPRC5AQ8NFJ5 357 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 RPAP3Q9H6T3 665 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-216ENST00000528739 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 GABRQQ9UN88 632 aa17.07■□□□□ 0.32
CAPN1-216ENST00000528739 SLC3A2P08195 630 aaKnown RBP17.06■□□□□ 0.32
CAPN1-216ENST00000528739 VCAM1P19320 739 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 GRK4P32298 578 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 FLT3LGP49771 235 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 RGS19P49795 217 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 CLEC10AQ8IUN9 316 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 ARMC5Q96C12 935 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 TANGO6Q9C0B7 1094 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
CAPN1-216ENST00000528739 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 PEX10O60683 326 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 UBXN2AP68543 259 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 GTF3C2Q8WUA4 911 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-216ENST00000528739 ZNF333Q96JL9 665 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
CAPN1-216ENST00000528739 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-216ENST00000528739 POTEFA5A3E0 1075 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 ADCY3O60266 1144 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 PRDM1O75626 825 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 PLEKHM2Q8IWE5 1019 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 SPICE1Q8N0Z3 855 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 KANSL2Q9H9L4 492 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 HELLSQ9NRZ9 838 aa17.04■□□□□ 0.32
CAPN1-216ENST00000528739 EEF2P13639 858 aaKnown RBP17.03■□□□□ 0.32
CAPN1-216ENST00000528739 PDE4BQ07343 736 aa17.03■□□□□ 0.32
CAPN1-216ENST00000528739 TXNRD2Q9NNW7 524 aa17.03■□□□□ 0.32
CAPN1-216ENST00000528739 RBPJLQ9UBG7 517 aa17.03■□□□□ 0.32
CAPN1-216ENST00000528739 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
CAPN1-216ENST00000528739 MYH7P12883 1935 aa17.03■□□□□ 0.32
CAPN1-216ENST00000528739 PTPRFP10586 1907 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 ELNP15502 786 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 ERVK-9P63128 1117 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 ERVK-24P63145 666 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 CCNA1P78396 465 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 Q3C1V9 767 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 SLAIN1Q8ND83 568 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 GOPCQ9HD26 462 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 HOXC10Q9NYD6 342 aa17.02■□□□□ 0.32
CAPN1-216ENST00000528739 TMX2Q9Y320 296 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms