RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 USP2O75604 605 aaPredicted RBP7.32□□□□□ -1.24
MACF1-228ENST00000528611 TSPY3P0CV98 308 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 TSPY8P0CW00 308 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 CALM1P0DP23 149 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 CALM2P0DP24 149 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 CALM3P0DP25 149 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 RASA1P20936 1047 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 CACNB3P54284 484 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 USP14P54578 494 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 EXOSC10Q01780 885 aaKnown RBP7.32□□□□□ -1.24
MACF1-228ENST00000528611 PPATQ06203 517 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 ABCB5Q2M3G0 1257 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 NBPF12Q5TAG4 269 aaPredicted RBP7.32□□□□□ -1.24
MACF1-228ENST00000528611 TEX2Q8IWB9 1127 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 ZFPM1Q8IX07 1006 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 MB21D2Q8IYB1 491 aaPredicted RBP7.32□□□□□ -1.24
MACF1-228ENST00000528611 SCYL3Q8IZE3 742 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 WDR18Q9BV38 432 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 OCEL1Q9H607 264 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 ZSWIM5Q9P217 1185 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 CSADQ9Y600 493 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 PAPPA2Q9BXP8 1791 aa7.32□□□□□ -1.24
MACF1-228ENST00000528611 BAZ2AQ9UIF9 1905 aaKnown RBP7.32□□□□□ -1.24
MACF1-228ENST00000528611 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 USP17L5A8MUK1 530 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 CXCL11O14625 94 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 TTLL1O95922 423 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 ZBTB48P10074 688 aaPredicted RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 FDX1P10109 184 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 PDIA4P13667 645 aaKnown RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 SMARCA1P28370 1054 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 INHBEP58166 350 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 TFAP4Q01664 338 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 MAP1SQ66K74 1059 aaPredicted RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 ERO1BQ86YB8 467 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 RGS22Q8NE09 1264 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 LPAR1Q92633 364 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 TRPM7Q96QT4 1865 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 ZSCAN10Q96SZ4 725 aaPredicted RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 UBAC1Q9BSL1 405 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 GLIS2Q9BZE0 524 aaPredicted RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 MAF1Q9H063 256 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 DNAJC18Q9H819 358 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 ARHGEF10LQ9HCE6 1279 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 GBA2Q9HCG7 927 aaPredicted RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 ZCCHC17Q9NP64 241 aaKnown RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 MTMR4Q9NYA4 1195 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 SAP30BPQ9UHR5 308 aaKnown RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 PNMA2Q9UL42 364 aa7.31□□□□□ -1.24
MACF1-228ENST00000528611 ANGEL1Q9UNK9 670 aaKnown RBP7.31□□□□□ -1.24
MACF1-228ENST00000528611 ASTN2O75129 1339 aaPredicted RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 SIPA1L1O43166 1804 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 CCDC196A0A1B0GTZ2 297 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 SPDYE5A6NIY4 337 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 TMEM88BA6NKF7 163 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 DHX16O60231 1041 aaKnown RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 RANBP6O60518 1105 aaKnown RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 PLA2G6O60733 806 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 KDM4AO75164 1064 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 RPS6KB1P23443 525 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 HAND2P61296 217 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 SH3D19Q5HYK7 790 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 TBC1D10CQ8IV04 446 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 FAM177A1Q8N128 213 aaPredicted RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 GMCL1P1Q8NEA9 526 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 IGDCC4Q8TDY8 1250 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 SNX21Q969T3 373 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 CCDC102AQ96A19 550 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 C12orf42Q96LP6 360 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 JAKMIP1Q96N16 626 aaKnown RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 WRNIP1Q96S55 665 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 KIAA1683Q9H0B3 1180 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 PICK1Q9NRD5 415 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 ZBTB21Q9ULJ3 1066 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 TMX2Q9Y320 296 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 MYH8P13535 1937 aa7.3□□□□□ -1.24
MACF1-228ENST00000528611 GREB1LQ9C091 1923 aaPredicted RBP7.3□□□□□ -1.24
MACF1-228ENST00000528611 SSC5DA1L4H1 1573 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 B4E1Z4 1266 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 USP17L10C9JJH3 530 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 ADM5C9JUS6 153 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 PRC1O43663 620 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 DDAH1O94760 285 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 CELF2O95319 508 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 CYP2D6P10635 497 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 TOP1P11387 765 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 PTPRAP18433 802 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 CASTP20810 708 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 GNAQP50148 359 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 TRAF1Q13077 416 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 PPIL2Q13356 520 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 WTAPQ15007 396 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 SEC23AQ15436 765 aa7.29□□□□□ -1.24
MACF1-228ENST00000528611 GPATCH4Q5T3I0 446 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 IFIT1BQ5T764 474 aaKnown RBP7.29□□□□□ -1.24
MACF1-228ENST00000528611 SYNE3Q6ZMZ3 975 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms