RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 NEFLP07196 543 aa22.35■■□□□ 1.17
YIF1A-212ENST00000528575 SHMT1P34896 483 aa22.35■■□□□ 1.17
YIF1A-212ENST00000528575 MFAP1P55081 439 aaKnown RBP22.35■■□□□ 1.17
YIF1A-212ENST00000528575 SH3D19Q5HYK7 790 aa22.35■■□□□ 1.17
YIF1A-212ENST00000528575 CTR9Q6PD62 1173 aa22.35■■□□□ 1.17
YIF1A-212ENST00000528575 M0R2C6 588 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 PRMT2P55345 433 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 KIF22Q14807 665 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 ABCB5Q2M3G0 1257 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 C16orf86Q6ZW13 317 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 ROBO3Q96MS0 1386 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 CEP290O15078 2479 aa22.34■■□□□ 1.17
YIF1A-212ENST00000528575 MYPNQ86TC9 1320 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 SPP2Q13103 211 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 PABPC4Q13310 644 aaKnown RBP eCLIP22.33■■□□□ 1.173e-6■■■□□ 17.2
YIF1A-212ENST00000528575 MCMDC2Q4G0Z9 681 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 UBE2Q1Q7Z7E8 422 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 NBPF11Q86T75 865 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 RILPL2Q969X0 211 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 AGTPBP1Q9UPW5 1226 aa22.33■■□□□ 1.17
YIF1A-212ENST00000528575 USP17L10C9JJH3 530 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 FMNL1O95466 1100 aaPredicted RBP22.32■■□□□ 1.16
YIF1A-212ENST00000528575 GH2P01242 217 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 TDO2P48775 406 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 BACE1P56817 501 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 SLC4A8Q2Y0W8 1093 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 POTEEQ6S8J3 1075 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 TMEM179Q6ZVK1 233 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 IFNL3Q8IZI9 196 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 TMEM106CQ9BVX2 250 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 PNMA3Q9UL41 463 aa22.32■■□□□ 1.16
YIF1A-212ENST00000528575 PLXNB2O15031 1838 aa22.31■■□□□ 1.16
YIF1A-212ENST00000528575 PEX10O60683 326 aa22.31■■□□□ 1.16
YIF1A-212ENST00000528575 GDF11O95390 407 aa22.31■■□□□ 1.16
YIF1A-212ENST00000528575 APPP05067 770 aa22.31■■□□□ 1.16
YIF1A-212ENST00000528575 GRK4P32298 578 aa22.31■■□□□ 1.16
YIF1A-212ENST00000528575 ERICH6BQ5W0A0 696 aa22.31■■□□□ 1.16
YIF1A-212ENST00000528575 SLC3A2P08195 630 aaKnown RBP22.3■■□□□ 1.16
YIF1A-212ENST00000528575 SDSP20132 328 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 PDE4AP27815 886 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 CDK8P49336 464 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 USP14P54578 494 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 TTC22Q5TAA0 569 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 SEC62Q99442 399 aaKnown RBP22.3■■□□□ 1.16
YIF1A-212ENST00000528575 NAPBQ9H115 298 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 TMOD4Q9NZQ9 345 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 ZMYM6O95789 1325 aa22.3■■□□□ 1.16
YIF1A-212ENST00000528575 LAMA3Q16787 3333 aa22.29■■□□□ 1.16
YIF1A-212ENST00000528575 CYP2D6P10635 497 aa22.29■■□□□ 1.16
YIF1A-212ENST00000528575 FLT3LGP49771 235 aa22.29■■□□□ 1.16
YIF1A-212ENST00000528575 HMGCS2P54868 508 aa22.29■■□□□ 1.16
YIF1A-212ENST00000528575 ALX1Q15699 326 aa22.29■■□□□ 1.16
YIF1A-212ENST00000528575 ANKRD13CQ8N6S4 541 aa22.29■■□□□ 1.16
YIF1A-212ENST00000528575 EPB41L4AQ9HCS5 686 aaPredicted RBP22.29■■□□□ 1.16
YIF1A-212ENST00000528575 BAZ2AQ9UIF9 1905 aaKnown RBP22.28■■□□□ 1.16
YIF1A-212ENST00000528575 FCGRTP55899 365 aa22.28■■□□□ 1.16
YIF1A-212ENST00000528575 EVX2Q03828 476 aa22.28■■□□□ 1.16
YIF1A-212ENST00000528575 RAET1EQ8TD07 263 aa22.28■■□□□ 1.16
YIF1A-212ENST00000528575 C12orf42Q96LP6 360 aa22.28■■□□□ 1.16
YIF1A-212ENST00000528575 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
YIF1A-212ENST00000528575 DIAPH3Q9NSV4 1193 aa22.28■■□□□ 1.16
YIF1A-212ENST00000528575 CCL5P13501 91 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 ELNP15502 786 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 MTMR2Q13614 643 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 RAB3GAP1Q15042 981 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 USP17L2Q6R6M4 530 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 UNC93B1Q9H1C4 597 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 SH2D4AQ9H788 454 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 CCDC171Q6TFL3 1326 aa22.27■■□□□ 1.16
YIF1A-212ENST00000528575 HOXA7P31268 230 aaPredicted RBP22.26■■□□□ 1.15
YIF1A-212ENST00000528575 NT5C2P49902 561 aa22.26■■□□□ 1.15
YIF1A-212ENST00000528575 PDE4BQ07343 736 aa22.26■■□□□ 1.15
YIF1A-212ENST00000528575 DYNLL2Q96FJ2 89 aa22.26■■□□□ 1.15
YIF1A-212ENST00000528575 FAM227BQ96M60 508 aa22.26■■□□□ 1.15
YIF1A-212ENST00000528575 ASCC2Q9H1I8 757 aaPredicted RBP22.26■■□□□ 1.15
YIF1A-212ENST00000528575 MKNK2Q9HBH9 465 aa22.26■■□□□ 1.15
YIF1A-212ENST00000528575 A0A0D9SFI3 127 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 MINDY4BA8MYZ0 360 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 MPHOSPH10O00566 681 aaKnown RBP22.25■■□□□ 1.15
YIF1A-212ENST00000528575 HOXD10P28358 340 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 GJA8P48165 433 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 NMIQ13287 307 aaPredicted RBP22.25■■□□□ 1.15
YIF1A-212ENST00000528575 FAM110CQ1W6H9 321 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 HABP4Q5JVS0 413 aaKnown RBP22.25■■□□□ 1.15
YIF1A-212ENST00000528575 GTF3C2Q8WUA4 911 aaPredicted RBP22.25■■□□□ 1.15
YIF1A-212ENST00000528575 FEZ1Q99689 392 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 KANSL2Q9H9L4 492 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 TXNRD2Q9NNW7 524 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 ANAPC4Q9UJX5 808 aa22.25■■□□□ 1.15
YIF1A-212ENST00000528575 CYP2D7A0A087X1C5 515 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 GJB1P08034 283 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 PPP4R3BQ5MIZ7 849 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 SLC44A5Q8NCS7 719 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 SMCR8Q8TEV9 937 aaPredicted RBP22.24■■□□□ 1.15
YIF1A-212ENST00000528575 CCDC136Q96JN2 1154 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 ARHGEF10LQ9HCE6 1279 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 GJD2Q9UKL4 321 aa22.24■■□□□ 1.15
YIF1A-212ENST00000528575 RAD50Q92878 1312 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms