RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.81
LTBP3-210ENST00000528516 MAGEB6P1A0A0J9YX57 407 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 TCERG1LQ5VWI1 586 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 FBXW10Q5XX13 1052 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 PSMB7Q99436 277 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 SAP30BPQ9UHR5 308 aaKnown RBP20.13■□□□□ 0.81
LTBP3-210ENST00000528516 AKR1B15C9JRZ8 316 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-210ENST00000528516 INPP5BP32019 993 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 GBP6Q6ZN66 633 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 FAM212AQ96EL1 285 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 MAP2K7O14733 419 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 MAP9Q49MG5 647 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 HAUS7Q99871 368 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 CEP83Q9Y592 693 aa20.13■□□□□ 0.81
LTBP3-210ENST00000528516 TTC19Q6DKK2 380 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-210ENST00000528516 KRT23Q9C075 422 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
LTBP3-210ENST00000528516 MED4Q9NPJ6 270 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 KDRP35968 1356 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 KDM4FA0A1W2PPD8 638 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 STAT6P42226 847 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 SLC35F6Q8N357 371 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 SMARCC2Q8TAQ2 1214 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 FAM76AQ8TAV0 307 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 BABAM1Q9NWV8 329 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 PIK3AP1Q6ZUJ8 805 aa20.12■□□□□ 0.81
LTBP3-210ENST00000528516 RIN2Q8WYP3 895 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-210ENST00000528516 TEX13AQ9BXU3 409 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-210ENST00000528516 ZMYND10O75800 440 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 GYG1P46976 350 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 SPA17Q15506 151 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 ANKZF1Q9H8Y5 726 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 YEATS4O95619 227 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 CDC25AP30304 524 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 DDB1Q16531 1140 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 AATFQ9NY61 560 aaKnown RBP eCLIP20.11■□□□□ 0.81
LTBP3-210ENST00000528516 L1RE1Q9UN81 338 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 FAM182BQ5T319 152 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 MAST3O60307 1309 aa20.11■□□□□ 0.81
LTBP3-210ENST00000528516 M0R2C6 588 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 PRKAB2O43741 272 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 CTDNEP1O95476 244 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 ZNF76P36508 570 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 BCAS4Q8TDM0 211 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 NAPGQ99747 312 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-210ENST00000528516 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 BRAPQ7Z569 592 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 JPH2Q9BR39 696 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-210ENST00000528516 BMP2KQ9NSY1 1161 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-210ENST00000528516 TCP11L1Q9NUJ3 509 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
LTBP3-210ENST00000528516 SAMM50Q9Y512 469 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 PCDHA5Q9Y5H7 936 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 CAPN7Q9Y6W3 813 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 CARMIL3Q8ND23 1372 aa20.1■□□□□ 0.81
LTBP3-210ENST00000528516 AKR1B10O60218 316 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 TSPY3P0CV98 308 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 TSPY8P0CW00 308 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 RNF187Q5TA31 235 aaPredicted RBP20.09■□□□□ 0.81
LTBP3-210ENST00000528516 CRACR2BQ8N4Y2 399 aaPredicted RBP20.09■□□□□ 0.81
LTBP3-210ENST00000528516 IGSF22Q8N9C0 903 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 SERTAD1Q9UHV2 236 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 CMA1P23946 247 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 RNASE9P60153 205 aaKnown RBP20.09■□□□□ 0.81
LTBP3-210ENST00000528516 PDE4BQ07343 736 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 SMYD4Q8IYR2 804 aaPredicted RBP20.09■□□□□ 0.81
LTBP3-210ENST00000528516 ASIC1P78348 528 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 TCIRG1Q13488 830 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 ODF2Q5BJF6 829 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 NCAPH2Q6IBW4 605 aa20.09■□□□□ 0.81
LTBP3-210ENST00000528516 ALDH8A1Q9H2A2 487 aaPredicted RBP20.09■□□□□ 0.81
LTBP3-210ENST00000528516 GOLGA6CA6NDK9 693 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 GOLGA6DP0CG33 693 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 KIFC2Q96AC6 838 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 GOLGA6AQ9NYA3 693 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 FAM169AQ9Y6X4 670 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 SEC31BQ9NQW1 1179 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 SUFUQ9UMX1 484 aa20.08■□□□□ 0.81
LTBP3-210ENST00000528516 C1orf167Q5SNV9 1468 aa20.08■□□□□ 0.8
LTBP3-210ENST00000528516 CYP27B1O15528 508 aa20.08■□□□□ 0.8
LTBP3-210ENST00000528516 LRRIQ3A6PVS8 624 aaPredicted RBP20.08■□□□□ 0.8
LTBP3-210ENST00000528516 UBXN1Q04323 297 aa20.08■□□□□ 0.8
LTBP3-210ENST00000528516 TAX1BP1Q86VP1 789 aa20.08■□□□□ 0.8
LTBP3-210ENST00000528516 STOX1Q6ZVD7 989 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 TC2NQ8N9U0 490 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.07■□□□□ 0.8
LTBP3-210ENST00000528516 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 CYP2D7A0A087X1C5 515 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 PDE6AP16499 860 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 NR5A1Q13285 461 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 OTUD6BQ8N6M0 293 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 MON2Q7Z3U7 1717 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 LETM2Q2VYF4 491 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 HNRNPLLQ8WVV9 542 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms