RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 CENPQQ7L2Z9 268 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-215ENST00000528396 FAM227BQ96M60 508 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 SH2D4AQ9H788 454 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 EFCC1Q9HA90 598 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 EPB41L4AQ9HCS5 686 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-215ENST00000528396 TRIM17Q9Y577 477 aa15.96■□□□□ 0.15
CAPN1-215ENST00000528396 A0A0D9SFI3 127 aa15.95■□□□□ 0.14
CAPN1-215ENST00000528396 SDSP20132 328 aa15.95■□□□□ 0.14
CAPN1-215ENST00000528396 ATP2B2Q01814 1243 aa15.95■□□□□ 0.14
CAPN1-215ENST00000528396 ABHD8Q96I13 439 aa15.95■□□□□ 0.14
CAPN1-215ENST00000528396 MYH8P13535 1937 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-215ENST00000528396 AKR1B1P15121 316 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 ICA1Q05084 483 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 PDE4BQ07343 736 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 TTC22Q5TAA0 569 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-215ENST00000528396 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 PTPRFP10586 1907 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 CCDC171Q6TFL3 1326 aa15.94■□□□□ 0.14
CAPN1-215ENST00000528396 ROBO3Q96MS0 1386 aa15.93■□□□□ 0.14
CAPN1-215ENST00000528396 SMIM22K7EJ46 135 aa15.93■□□□□ 0.14
CAPN1-215ENST00000528396 LACTBP83111 547 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-215ENST00000528396 PPARAQ07869 468 aa15.93■□□□□ 0.14
CAPN1-215ENST00000528396 CWC27Q6UX04 472 aaKnown RBP15.93■□□□□ 0.14
CAPN1-215ENST00000528396 C17orf99Q6UX52 265 aa15.93■□□□□ 0.14
CAPN1-215ENST00000528396 ACER1Q8TDN7 264 aa15.93■□□□□ 0.14
CAPN1-215ENST00000528396 KIAA1683Q9H0B3 1180 aa15.93■□□□□ 0.14
CAPN1-215ENST00000528396 ASCC2Q9H1I8 757 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-215ENST00000528396 RAD21O60216 631 aa15.92■□□□□ 0.14
CAPN1-215ENST00000528396 PRDM1O75626 825 aa15.92■□□□□ 0.14
CAPN1-215ENST00000528396 FMNL1O95466 1100 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-215ENST00000528396 GCLCP48506 637 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-215ENST00000528396 FBXO46Q6PJ61 603 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-215ENST00000528396 OTOP1Q7RTM1 612 aa15.92■□□□□ 0.14
CAPN1-215ENST00000528396 KANSL2Q9H9L4 492 aa15.92■□□□□ 0.14
CAPN1-215ENST00000528396 EMILIN3Q9NT22 766 aa15.92■□□□□ 0.14
CAPN1-215ENST00000528396 LOC285556D6RIA3 1793 aa15.92■□□□□ 0.14
CAPN1-215ENST00000528396 CCDC85CA6NKD9 419 aa15.91■□□□□ 0.14
CAPN1-215ENST00000528396 GUCY1A2P33402 732 aa15.91■□□□□ 0.14
CAPN1-215ENST00000528396 VPS53Q5VIR6 699 aa15.91■□□□□ 0.14
CAPN1-215ENST00000528396 ADGRA2Q96PE1 1338 aa15.91■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L15C9J2P7 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L13C9JLJ4 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L11C9JVI0 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L18D6R9N7 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L22D6RA61 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L17D6RBQ6 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L19D6RCP7 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L20D6RJB6 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 GNRH1P01148 92 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 TSPY3P0CV98 308 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 TSPY8P0CW00 308 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 VCAM1P19320 739 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 RASA1P20936 1047 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 HOXD10P28358 340 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 HOXA7P31268 230 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-215ENST00000528396 PSMC4P43686 418 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 FCGRTP55899 365 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 USP17L24Q0WX57 530 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 ZNF589Q86UQ0 364 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-215ENST00000528396 CLEC10AQ8IUN9 316 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 CCAR1Q8IX12 1150 aaKnown RBP15.9■□□□□ 0.14
CAPN1-215ENST00000528396 ANKRD13CQ8N6S4 541 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 RUFY2Q8WXA3 655 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 TANGO6Q9C0B7 1094 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 GOPCQ9HD26 462 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 TOMM22Q9NS69 142 aa15.9■□□□□ 0.14
CAPN1-215ENST00000528396 HSPD1P10809 573 aaKnown RBP15.89■□□□□ 0.13
CAPN1-215ENST00000528396 BCRP11274 1271 aa15.89■□□□□ 0.13
CAPN1-215ENST00000528396 GSPT1P15170 499 aaKnown RBP15.89■□□□□ 0.13
CAPN1-215ENST00000528396 ALX1Q15699 326 aa15.89■□□□□ 0.13
CAPN1-215ENST00000528396 GTF3C2Q8WUA4 911 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-215ENST00000528396 P2RX7Q99572 595 aaKnown RBP15.89■□□□□ 0.13
CAPN1-215ENST00000528396 RPAP3Q9H6T3 665 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-215ENST00000528396 CWC22Q9HCG8 908 aaKnown RBP15.89■□□□□ 0.13
CAPN1-215ENST00000528396 HPS5Q9UPZ3 1129 aa15.89■□□□□ 0.13
CAPN1-215ENST00000528396 FGAP02671 866 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 EEF2P13639 858 aaKnown RBP15.88■□□□□ 0.13
CAPN1-215ENST00000528396 HERVK_113P62684 666 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 CTDSPL2Q05D32 466 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 FAM110CQ1W6H9 321 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 LPAR1Q92633 364 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 PAGR1Q9BTK6 254 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 ARHGAP39Q9C0H5 1083 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 PTPN22Q9Y2R2 807 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 TMX2Q9Y320 296 aa15.88■□□□□ 0.13
CAPN1-215ENST00000528396 A0A1W2PRG0 241 aa15.87■□□□□ 0.13
CAPN1-215ENST00000528396 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
CAPN1-215ENST00000528396 TNPO2O14787 897 aaKnown RBP15.87■□□□□ 0.13
CAPN1-215ENST00000528396 FOXP2O15409 715 aa15.87■□□□□ 0.13
CAPN1-215ENST00000528396 RANBP6O60518 1105 aaKnown RBP15.87■□□□□ 0.13
CAPN1-215ENST00000528396 PRMT2P55345 433 aa15.87■□□□□ 0.13
CAPN1-215ENST00000528396 TFAP4Q01664 338 aa15.87■□□□□ 0.13
CAPN1-215ENST00000528396 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
CAPN1-215ENST00000528396 SPICE1Q8N0Z3 855 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms