RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CCL5P13501 91 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 ELNP15502 786 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 CCAR1Q8IX12 1150 aaKnown RBP23.17■■□□□ 1.3
CAPN1-211ENST00000527739 GPRC5AQ8NFJ5 357 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 PAGR1Q9BTK6 254 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 SWAP70Q9UH65 585 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 MYH1P12882 1939 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 MGAMO43451 1857 aa23.17■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L15C9J2P7 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L13C9JLJ4 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L11C9JVI0 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L18D6R9N7 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L22D6RA61 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L17D6RBQ6 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L19D6RCP7 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L20D6RJB6 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 ERC2O15083 957 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 RNF113AO15541 343 aaKnown RBP23.16■■□□□ 1.3
CAPN1-211ENST00000527739 USP17L24Q0WX57 530 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 ANKRD45Q5TZF3 282 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 OTUD7AQ8TE49 926 aaPredicted RBP23.16■■□□□ 1.3
CAPN1-211ENST00000527739 RNF208Q9H0X6 261 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 ATAD5Q96QE3 1844 aa23.16■■□□□ 1.3
CAPN1-211ENST00000527739 GUCY1A2P33402 732 aa23.15■■□□□ 1.3
CAPN1-211ENST00000527739 C12orf60Q5U649 245 aa23.15■■□□□ 1.3
CAPN1-211ENST00000527739 KIAA1683Q9H0B3 1180 aa23.15■■□□□ 1.3
CAPN1-211ENST00000527739 MORF4L1Q9UBU8 362 aa23.15■■□□□ 1.3
CAPN1-211ENST00000527739 PTPRFP10586 1907 aa23.15■■□□□ 1.3
CAPN1-211ENST00000527739 CEP290O15078 2479 aa23.15■■□□□ 1.3
CAPN1-211ENST00000527739 TTC41PQ6P2S7 1318 aa23.14■■□□□ 1.3
CAPN1-211ENST00000527739 UBE2Q1Q7Z7E8 422 aa23.14■■□□□ 1.29
CAPN1-211ENST00000527739 C12orf42Q96LP6 360 aa23.14■■□□□ 1.29
CAPN1-211ENST00000527739 STRBPQ96SI9 672 aaKnown RBP23.14■■□□□ 1.29
CAPN1-211ENST00000527739 CWC22Q9HCG8 908 aaKnown RBP23.14■■□□□ 1.29
CAPN1-211ENST00000527739 TXNRD2Q9NNW7 524 aa23.14■■□□□ 1.29
CAPN1-211ENST00000527739 RBPJLQ9UBG7 517 aa23.14■■□□□ 1.29
CAPN1-211ENST00000527739 SMIM22K7EJ46 135 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 GJB1P08034 283 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 ZFYP08048 801 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-211ENST00000527739 AKR1B1P15121 316 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 VCAM1P19320 739 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 GJA8P48165 433 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 CDK8P49336 464 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 IRF5Q13568 498 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 LRRFIP1Q32MZ4 808 aaKnown RBP23.13■■□□□ 1.29
CAPN1-211ENST00000527739 CTR9Q6PD62 1173 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 TMEM179Q6ZVK1 233 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 STK11IPQ8N1F8 1099 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 PXYLP1Q8TE99 480 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 GTF3C2Q8WUA4 911 aaPredicted RBP23.13■■□□□ 1.29
CAPN1-211ENST00000527739 APPBP2Q92624 585 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 OSBP2Q969R2 916 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 UNC93B1Q9H1C4 597 aa23.13■■□□□ 1.29
CAPN1-211ENST00000527739 GLRX3O76003 335 aaKnown RBP23.12■■□□□ 1.29
CAPN1-211ENST00000527739 APPP05067 770 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 INHAP05111 366 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 MX1P20591 662 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 Q3C1V9 767 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 CHRDL2Q6WN34 429 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 CATSPERGQ6ZRH7 1159 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 NKX2-3Q8TAU0 364 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 DPF3Q92784 378 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 FSD1Q9BTV5 496 aa23.12■■□□□ 1.29
CAPN1-211ENST00000527739 RPAP3Q9H6T3 665 aaPredicted RBP23.12■■□□□ 1.29
CAPN1-211ENST00000527739 ERVK-9P63128 1117 aa23.11■■□□□ 1.29
CAPN1-211ENST00000527739 ERVK-24P63145 666 aa23.11■■□□□ 1.29
CAPN1-211ENST00000527739 ATP2B2Q01814 1243 aa23.11■■□□□ 1.29
CAPN1-211ENST00000527739 LOC285556D6RIA3 1793 aa23.11■■□□□ 1.29
CAPN1-211ENST00000527739 A0A1W2PRG0 241 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 MINDY4BA8MYZ0 360 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 C16orf86Q6ZW13 317 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 CLEC10AQ8IUN9 316 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 PI4K2BQ8TCG2 481 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 U2AF1L4Q8WU68 220 aaKnown RBP23.1■■□□□ 1.29
CAPN1-211ENST00000527739 CCDC17Q96LX7 622 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 ARHGEF10LQ9HCE6 1279 aa23.1■■□□□ 1.29
CAPN1-211ENST00000527739 ARPP21Q9UBL0 812 aaPredicted RBP23.1■■□□□ 1.29
CAPN1-211ENST00000527739 GPAA1O43292 621 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 CYP2B6P20813 491 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 MAPK4P31152 587 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 ICA1Q05084 483 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 WDR78Q5VTH9 848 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 TANGO6Q9C0B7 1094 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 GJD2Q9UKL4 321 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 NAV1Q8NEY1 1877 aa23.09■■□□□ 1.29
CAPN1-211ENST00000527739 TRIOBPQ9H2D6 2365 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 SZT2Q5T011 3432 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 GSG1L2A8MUP6 293 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 M0R2C6 588 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 TDO2P48775 406 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 HDAC1Q13547 482 aaPredicted RBP23.08■■□□□ 1.29
CAPN1-211ENST00000527739 SAMD1Q6SPF0 538 aaPredicted RBP23.08■■□□□ 1.29
CAPN1-211ENST00000527739 NUDT12Q9BQG2 462 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 PORCNQ9H237 461 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 MKNK2Q9HBH9 465 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 RABGAP1Q9Y3P9 1069 aa23.08■■□□□ 1.29
CAPN1-211ENST00000527739 RAD21O60216 631 aa23.07■■□□□ 1.28
CAPN1-211ENST00000527739 GNAT2P19087 354 aa23.07■■□□□ 1.28
CAPN1-211ENST00000527739 CCNA1P78396 465 aa23.07■■□□□ 1.28
CAPN1-211ENST00000527739 SPICE1Q8N0Z3 855 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms