RNA–Protein interactions for RNA: ENST00000527653.1

GPAA1-209, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-209ENST00000527653 SHROOM1Q2M3G4 852 aaPredicted RBP22.81■■□□□ 1.24
GPAA1-209ENST00000527653 NOM1Q5C9Z4 860 aaKnown RBP22.81■■□□□ 1.24
GPAA1-209ENST00000527653 USP17L2Q6R6M4 530 aa22.81■■□□□ 1.24
GPAA1-209ENST00000527653 CASC1Q6TDU7 716 aa22.81■■□□□ 1.24
GPAA1-209ENST00000527653 SMCR8Q8TEV9 937 aaPredicted RBP22.81■■□□□ 1.24
GPAA1-209ENST00000527653 SLC45A1Q9Y2W3 748 aa22.81■■□□□ 1.24
GPAA1-209ENST00000527653 CASP8AP2Q9UKL3 1982 aa22.8■■□□□ 1.24
GPAA1-209ENST00000527653 FKTNO75072 461 aa22.8■■□□□ 1.24
GPAA1-209ENST00000527653 SH3D19Q5HYK7 790 aa22.8■■□□□ 1.24
GPAA1-209ENST00000527653 OSBPP22059 807 aa22.79■■□□□ 1.24
GPAA1-209ENST00000527653 ATP2B2Q01814 1243 aa22.79■■□□□ 1.24
GPAA1-209ENST00000527653 BMP2KLQ5H9B9 411 aa22.79■■□□□ 1.24
GPAA1-209ENST00000527653 TOMM22Q9NS69 142 aa22.79■■□□□ 1.24
GPAA1-209ENST00000527653 CTNNA3Q9UI47 895 aa22.79■■□□□ 1.24
GPAA1-209ENST00000527653 TLR2O60603 784 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 FGAP02671 866 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 TSPY3P0CV98 308 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 TSPY8P0CW00 308 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 CHMLP26374 656 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 IRX3P78415 501 aaPredicted RBP22.78■■□□□ 1.24
GPAA1-209ENST00000527653 ARHGEF6Q15052 776 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 ZNF296Q8WUU4 475 aaPredicted RBP22.78■■□□□ 1.24
GPAA1-209ENST00000527653 ERO1AQ96HE7 468 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 DSCC1Q9BVC3 393 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 KIAA1683Q9H0B3 1180 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 KANSL2Q9H9L4 492 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 LAMA4Q16363 1823 aa22.78■■□□□ 1.24
GPAA1-209ENST00000527653 SMIM22K7EJ46 135 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 PRDM1O75626 825 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 RASA1P20936 1047 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 CTDSPL2Q05D32 466 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 MOGSQ13724 837 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 KIF22Q14807 665 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 GPAT2Q6NUI2 795 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 ANAPC4Q9UJX5 808 aa22.77■■□□□ 1.24
GPAA1-209ENST00000527653 TSPY2A6NKD2 308 aa22.76■■□□□ 1.23
GPAA1-209ENST00000527653 ZNF213O14771 459 aa22.76■■□□□ 1.23
GPAA1-209ENST00000527653 FOXP2O15409 715 aa22.76■■□□□ 1.23
GPAA1-209ENST00000527653 SP3Q02447 781 aa22.76■■□□□ 1.23
GPAA1-209ENST00000527653 PPP4R3BQ5MIZ7 849 aa22.76■■□□□ 1.23
GPAA1-209ENST00000527653 TREML2Q5T2D2 321 aa22.76■■□□□ 1.23
GPAA1-209ENST00000527653 RNF41Q9H4P4 317 aaPredicted RBP22.76■■□□□ 1.23
GPAA1-209ENST00000527653 PCP11498 1178 aaKnown RBP22.75■■□□□ 1.23
GPAA1-209ENST00000527653 GUCY1A2P33402 732 aa22.75■■□□□ 1.23
GPAA1-209ENST00000527653 IMMTQ16891 758 aaKnown RBP22.75■■□□□ 1.23
GPAA1-209ENST00000527653 COL13A1Q5TAT6 717 aaPredicted RBP22.75■■□□□ 1.23
GPAA1-209ENST00000527653 KIAA1211Q6ZU35 1233 aa22.75■■□□□ 1.23
GPAA1-209ENST00000527653 RAD21O60216 631 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 CYP2C8P10632 490 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 HAND2P61296 217 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 SKAP1Q86WV1 359 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 TNS4Q8IZW8 715 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 ACER1Q8TDN7 264 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 C12orf42Q96LP6 360 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 R3HDMLQ9H3Y0 253 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 GOPCQ9HD26 462 aa22.74■■□□□ 1.23
GPAA1-209ENST00000527653 GREB1LQ9C091 1923 aaPredicted RBP22.74■■□□□ 1.23
GPAA1-209ENST00000527653 RANBP6O60518 1105 aaKnown RBP22.73■■□□□ 1.23
GPAA1-209ENST00000527653 DGKZQ13574 1117 aa22.73■■□□□ 1.23
GPAA1-209ENST00000527653 RRP12Q5JTH9 1297 aaKnown RBP22.73■■□□□ 1.23
GPAA1-209ENST00000527653 MFSD6Q6ZSS7 791 aa22.73■■□□□ 1.23
GPAA1-209ENST00000527653 LPAR1Q92633 364 aa22.73■■□□□ 1.23
GPAA1-209ENST00000527653 CPA4Q9UI42 421 aa22.73■■□□□ 1.23
GPAA1-209ENST00000527653 MYH4Q9Y623 1939 aa22.72■■□□□ 1.23
GPAA1-209ENST00000527653 EEF2P13639 858 aaKnown RBP22.72■■□□□ 1.23
GPAA1-209ENST00000527653 GCLCP48506 637 aaPredicted RBP22.72■■□□□ 1.23
GPAA1-209ENST00000527653 TFAP4Q01664 338 aa22.72■■□□□ 1.23
GPAA1-209ENST00000527653 CTU1Q7Z7A3 348 aaKnown RBP22.72■■□□□ 1.23
GPAA1-209ENST00000527653 CLEC10AQ8IUN9 316 aa22.72■■□□□ 1.23
GPAA1-209ENST00000527653 GTF3C2Q8WUA4 911 aaPredicted RBP22.72■■□□□ 1.23
GPAA1-209ENST00000527653 EMILIN3Q9NT22 766 aa22.72■■□□□ 1.23
GPAA1-209ENST00000527653 TMX2Q9Y320 296 aa22.72■■□□□ 1.23
GPAA1-209ENST00000527653 PLIN4Q96Q06 1357 aa22.72■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L15C9J2P7 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L13C9JLJ4 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L11C9JVI0 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L18D6R9N7 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L22D6RA61 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L17D6RBQ6 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L19D6RCP7 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L20D6RJB6 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 SGSM2O43147 1006 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 CDC45O75419 566 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 VCAM1P19320 739 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 USP17L24Q0WX57 530 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 AKNAD1Q5T1N1 836 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 NEDD1Q8NHV4 660 aa22.71■■□□□ 1.23
GPAA1-209ENST00000527653 ASCC2Q9H1I8 757 aaPredicted RBP22.71■■□□□ 1.23
GPAA1-209ENST00000527653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.71■■□□□ 1.23
GPAA1-209ENST00000527653 ORC4O43929 436 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 TTLL1O95922 423 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 HOXA7P31268 230 aaPredicted RBP22.7■■□□□ 1.22
GPAA1-209ENST00000527653 NT5C2P49902 561 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 FAM47AQ5JRC9 791 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 CD99L2Q8TCZ2 262 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 STAG1Q8WVM7 1258 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 TANGO6Q9C0B7 1094 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 VCPKMTQ9H867 229 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 NYAP2Q9P242 653 aa22.7■■□□□ 1.22
GPAA1-209ENST00000527653 U3KPZ7 1027 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms