RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 PMM1Q92871 262 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.42□□□□□ -1.06
SOX6-208ENST00000527619 UNC45AQ9H3U1 944 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 SBNO1A3KN83 1393 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 SPTLC2O15270 562 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 EIF3HO15372 352 aaKnown RBP eCLIP8.42□□□□□ -1.06
SOX6-208ENST00000527619 BDNFP23560 247 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 GCKP35557 465 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 GUCY1B3Q02153 619 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 PRPF4BQ13523 1007 aaKnown RBP8.42□□□□□ -1.06
SOX6-208ENST00000527619 MTF1Q14872 753 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 C3orf20Q8ND61 904 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 FSD1Q9BTV5 496 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 CAPS2Q9BXY5 557 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 C19orf44Q9H6X5 657 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 CD248Q9HCU0 757 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 ADGRG1Q9Y653 693 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 CLIC4Q9Y696 253 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 RGPD1P0DJD0 1748 aa8.42□□□□□ -1.06
SOX6-208ENST00000527619 UBR1Q8IWV7 1749 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 SOWAHDA6NJG2 315 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 MYO1FO00160 1098 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 KIAA0754O94854 1291 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 PFKFB1P16118 471 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 ZNF24P17028 368 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 VCAM1P19320 739 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 GGCXP38435 758 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 AMPHP49418 695 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 SLC7A5Q01650 507 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 B4GALNT4Q76KP1 1039 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 ZNF589Q86UQ0 364 aaPredicted RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 SPATS2Q86XZ4 545 aaKnown RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 NOA1Q8NC60 698 aaKnown RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 PARD3BQ8TEW8 1205 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 COG1Q8WTW3 980 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 PANX2Q96RD6 677 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 NAPGQ99747 312 aaPredicted RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 NAA15Q9BXJ9 866 aaKnown RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 TRIM7Q9C029 511 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 POLR3EQ9NVU0 708 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 SALL1Q9NSC2 1324 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 TAF5LO75529 589 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 CMA1P23946 247 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 TRPC1P48995 793 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 RAB27AP51159 221 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 AACSQ86V21 672 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 SLC35F6Q8N357 371 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 TBC1D5Q92609 795 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 POLR3CQ9BUI4 534 aaPredicted RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 TPX2Q9ULW0 747 aaKnown RBP8.41□□□□□ -1.06
SOX6-208ENST00000527619 GRIN2DO15399 1336 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 MON2Q7Z3U7 1717 aa8.41□□□□□ -1.06
SOX6-208ENST00000527619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
SOX6-208ENST00000527619 AKR1B15C9JRZ8 316 aaPredicted RBP8.4□□□□□ -1.06
SOX6-208ENST00000527619 MYL1P05976 194 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 NBPF7P0C2Y1 421 aaPredicted RBP8.4□□□□□ -1.06
SOX6-208ENST00000527619 TCF3P15923 654 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 ARHGAP25P42331 645 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 GJA8P48165 433 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 APLP1P51693 650 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 USP14P54578 494 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 AKAP17AQ02040 695 aaKnown RBP8.4□□□□□ -1.06
SOX6-208ENST00000527619 WLSQ5T9L3 541 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 SAMD3Q8N6K7 520 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 RIN2Q8WYP3 895 aaPredicted RBP8.4□□□□□ -1.06
SOX6-208ENST00000527619 SEC62Q99442 399 aaKnown RBP8.4□□□□□ -1.06
SOX6-208ENST00000527619 ODF2LQ9ULJ1 636 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 CARMIL3Q8ND23 1372 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 CPS1P31327 1500 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 LRRC37A3O60309 1634 aa8.4□□□□□ -1.06
SOX6-208ENST00000527619 FOXO3O43524 673 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 SASH1O94885 1247 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 TFRCP02786 760 aaKnown RBP8.4□□□□□ -1.07
SOX6-208ENST00000527619 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.07
SOX6-208ENST00000527619 GNGT1P63211 74 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 MECOMQ03112 1051 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 RAD9BQ6WBX8 426 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 RASGRP2Q7LDG7 609 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 SPATA21Q7Z572 469 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 IQCA1Q86XH1 822 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 THRAP3Q9Y2W1 955 aaKnown RBP8.4□□□□□ -1.07
SOX6-208ENST00000527619 TMEM131LA2VDJ0 1609 aa8.4□□□□□ -1.07
SOX6-208ENST00000527619 LAMA4Q16363 1823 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 A0A0U1RQJ8 604 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 RTN2O75298 545 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 SYKP43405 635 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 SESN3P58005 492 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 SFMBT2Q5VUG0 894 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 ATRIPQ8WXE1 791 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 TAF4BQ92750 862 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 KIF9Q9HAQ2 790 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 MYO6Q9UM54 1294 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 TTF2Q9UNY4 1162 aaKnown RBP8.39□□□□□ -1.07
SOX6-208ENST00000527619 SAMM50Q9Y512 469 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 U3KPZ7 1027 aaPredicted RBP8.39□□□□□ -1.07
SOX6-208ENST00000527619 MROH7-TTC4A0A0A0MT08 1334 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 A6NNZ2 444 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms