RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 BRPF3Q9ULD4 1205 aa21.94■■□□□ 1.1
SMPD1-203ENST00000527275 DDX49Q9Y6V7 483 aaKnown RBP21.94■■□□□ 1.1
SMPD1-203ENST00000527275 TBC1D12O60347 775 aa21.94■■□□□ 1.1
SMPD1-203ENST00000527275 WTAPQ15007 396 aa21.94■■□□□ 1.1
SMPD1-203ENST00000527275 SULF1Q8IWU6 871 aa21.94■■□□□ 1.1
SMPD1-203ENST00000527275 PFKFB2O60825 505 aa21.93■■□□□ 1.1
SMPD1-203ENST00000527275 PDIA4P13667 645 aaKnown RBP21.93■■□□□ 1.1
SMPD1-203ENST00000527275 VEGFAP15692 232 aaPredicted RBP21.93■■□□□ 1.1
SMPD1-203ENST00000527275 EVCP57679 992 aa21.93■■□□□ 1.1
SMPD1-203ENST00000527275 MAP3K10Q02779 954 aa21.93■■□□□ 1.1
SMPD1-203ENST00000527275 RRP1BQ14684 758 aaKnown RBP21.93■■□□□ 1.1
SMPD1-203ENST00000527275 LARP1BQ659C4 914 aaKnown RBP21.93■■□□□ 1.1
SMPD1-203ENST00000527275 DLK2Q6UY11 383 aa21.93■■□□□ 1.1
SMPD1-203ENST00000527275 ZNF526Q8TF50 670 aaPredicted RBP21.93■■□□□ 1.1
SMPD1-203ENST00000527275 POTEIP0CG38 1075 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 POTEJP0CG39 1038 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 SHROOM1Q2M3G4 852 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-203ENST00000527275 KLHL40Q2TBA0 621 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 RCSD1Q6JBY9 416 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 KRT26Q7Z3Y9 468 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 SGMS1Q86VZ5 419 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 CCDC17Q96LX7 622 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 TCP11L1Q9NUJ3 509 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 NAP1L2Q9ULW6 460 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-203ENST00000527275 MTMR6Q9Y217 621 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 PPP2R3BQ9Y5P8 575 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 KLF18A0A0U1RQI7 1052 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 MPHOSPH10O00566 681 aaKnown RBP21.92■■□□□ 1.1
SMPD1-203ENST00000527275 PDCP20941 246 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 SCRN1Q12765 414 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 FOXD4L6Q3SYB3 417 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-203ENST00000527275 FOXD4L3Q6VB84 417 aaPredicted RBP21.92■■□□□ 1.1
SMPD1-203ENST00000527275 NFXL1Q6ZNB6 911 aa21.92■■□□□ 1.1
SMPD1-203ENST00000527275 ADM5C9JUS6 153 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 GDF11O95390 407 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 F13A1P00488 732 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 IFIT1BQ5T764 474 aaKnown RBP21.91■■□□□ 1.1
SMPD1-203ENST00000527275 TMTC2Q8N394 836 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 ZNF274Q96GC6 653 aaPredicted RBP21.91■■□□□ 1.1
SMPD1-203ENST00000527275 CEP95Q96GE4 821 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 STX8Q9UNK0 236 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 PDIA3P30101 505 aaKnown RBP21.91■■□□□ 1.1
SMPD1-203ENST00000527275 NMRK2Q9NPI5 230 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 PLIN4Q96Q06 1357 aa21.91■■□□□ 1.1
SMPD1-203ENST00000527275 JAG1P78504 1218 aa21.9■■□□□ 1.1
SMPD1-203ENST00000527275 APOA5Q6Q788 366 aa21.9■■□□□ 1.1
SMPD1-203ENST00000527275 DGKHQ86XP1 1220 aa21.9■■□□□ 1.1
SMPD1-203ENST00000527275 RAB11FIP4Q86YS3 637 aa21.9■■□□□ 1.1
SMPD1-203ENST00000527275 VPS37CA5D8V6 355 aaPredicted RBP21.89■■□□□ 1.1
SMPD1-203ENST00000527275 CCDC69A6NI79 296 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 ABCB5Q2M3G0 1257 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 CLEC10AQ8IUN9 316 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 LLPHQ9BRT6 129 aaKnown RBP21.89■■□□□ 1.1
SMPD1-203ENST00000527275 MYL10Q9BUA6 226 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 CLEC11AQ9Y240 323 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 ATP6V1DQ9Y5K8 247 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 SLC12A7Q9Y666 1083 aa21.89■■□□□ 1.1
SMPD1-203ENST00000527275 MTMR4Q9NYA4 1195 aa21.89■■□□□ 1.09
SMPD1-203ENST00000527275 PHF20L1A8MW92 1017 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 JAK2O60674 1132 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 RXRAP19793 462 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 USP48Q86UV5 1035 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 FZD1Q9UP38 647 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 HPS5Q9UPZ3 1129 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 IGKV6D-41A0A0C4DH26 115 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 GOLGA8BA8MQT2 603 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 GH2P01242 217 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 CCT2P78371 535 aaKnown RBP21.88■■□□□ 1.09
SMPD1-203ENST00000527275 SUPT20HL1Q3ZLR7 823 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 CCDC178Q5BJE1 867 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 MICU3Q86XE3 530 aa21.88■■□□□ 1.09
SMPD1-203ENST00000527275 NCLP19338 710 aaKnown RBP21.87■■□□□ 1.09
SMPD1-203ENST00000527275 SEPT2Q15019 361 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 TMEM179Q6ZVK1 233 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 ANKS1AQ92625 1134 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 HOOK2Q96ED9 719 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 GLIS2Q9BZE0 524 aaPredicted RBP21.87■■□□□ 1.09
SMPD1-203ENST00000527275 ZBTB43O43298 467 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 GUCY1A2P33402 732 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 NOVP48745 357 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 DCAF15Q66K64 600 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 ZNF654Q8IZM8 581 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 SMARCC2Q8TAQ2 1214 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 CHMP4CQ96CF2 233 aa21.87■■□□□ 1.09
SMPD1-203ENST00000527275 NCOA5Q9HCD5 579 aaKnown RBP21.87■■□□□ 1.09
SMPD1-203ENST00000527275 CAP2P40123 477 aa21.86■■□□□ 1.09
SMPD1-203ENST00000527275 MAP1SQ66K74 1059 aaPredicted RBP21.86■■□□□ 1.09
SMPD1-203ENST00000527275 CDC37L1Q7L3B6 337 aa21.86■■□□□ 1.09
SMPD1-203ENST00000527275 TMEM47Q9BQJ4 181 aa21.86■■□□□ 1.09
SMPD1-203ENST00000527275 CABP5Q9NP86 173 aa21.86■■□□□ 1.09
SMPD1-203ENST00000527275 GREB1LQ9C091 1923 aaPredicted RBP21.86■■□□□ 1.09
SMPD1-203ENST00000527275 SSC5DA1L4H1 1573 aa21.86■■□□□ 1.09
SMPD1-203ENST00000527275 SYNE3Q6ZMZ3 975 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 CCDC144CPQ8IYA2 1237 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 NSUN7Q8NE18 718 aaKnown RBP21.85■■□□□ 1.09
SMPD1-203ENST00000527275 DDX11Q96FC9 970 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 KAT14Q9H8E8 782 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 KANSL2Q9H9L4 492 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 TTLL1O95922 423 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 TROAPQ12815 778 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms