RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 SWAP70Q9UH65 585 aa21.75■■□□□ 1.07
TRIM3-205ENST00000527237 FOXP2O15409 715 aa21.74■■□□□ 1.07
TRIM3-205ENST00000527237 SOX10P56693 466 aa21.74■■□□□ 1.07
TRIM3-205ENST00000527237 LRRFIP1Q32MZ4 808 aaKnown RBP21.74■■□□□ 1.07
TRIM3-205ENST00000527237 TRIM47Q96LD4 638 aa21.74■■□□□ 1.07
TRIM3-205ENST00000527237 CABP5Q9NP86 173 aa21.74■■□□□ 1.07
TRIM3-205ENST00000527237 TMOD4Q9NZQ9 345 aa21.74■■□□□ 1.07
TRIM3-205ENST00000527237 PTCH2Q9Y6C5 1203 aa21.74■■□□□ 1.07
TRIM3-205ENST00000527237 A0A0D9SFI3 127 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 C19orf81C9J6K1 198 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 PEX10O60683 326 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 PDE4AP27815 886 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 AMOTL1Q8IY63 956 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 FAM227BQ96M60 508 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 PNMA3Q9UL41 463 aa21.73■■□□□ 1.07
TRIM3-205ENST00000527237 A0A1W2PRG0 241 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 MINDY4BA8MYZ0 360 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 TRIM6-TRIM34B2RNG4 842 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 PSMC4P43686 418 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 TDO2P48775 406 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 KIF22Q14807 665 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 SBK1Q52WX2 424 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 USP17L2Q6R6M4 530 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 ANKRD13CQ8N6S4 541 aa21.72■■□□□ 1.07
TRIM3-205ENST00000527237 APPP05067 770 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 GNAT2P19087 354 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 VPS53Q5VIR6 699 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 GIMAP6Q6P9H5 292 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 IFNL3Q8IZI9 196 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 C12orf42Q96LP6 360 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 KIAA1683Q9H0B3 1180 aa21.71■■□□□ 1.07
TRIM3-205ENST00000527237 BRCA2P51587 3418 aa21.7■■□□□ 1.06
TRIM3-205ENST00000527237 VCAM1P19320 739 aa21.7■■□□□ 1.06
TRIM3-205ENST00000527237 OSBPP22059 807 aa21.7■■□□□ 1.06
TRIM3-205ENST00000527237 IRX3P78415 501 aaPredicted RBP21.7■■□□□ 1.06
TRIM3-205ENST00000527237 PABPC4Q13310 644 aaKnown RBP eCLIP21.7■■□□□ 1.06
TRIM3-205ENST00000527237 TMEM179Q6ZVK1 233 aa21.7■■□□□ 1.06
TRIM3-205ENST00000527237 RILPL2Q969X0 211 aa21.7■■□□□ 1.06
TRIM3-205ENST00000527237 OSBPL3Q9H4L5 887 aa21.7■■□□□ 1.06
TRIM3-205ENST00000527237 PATL2C9JE40 543 aaKnown RBP21.69■■□□□ 1.06
TRIM3-205ENST00000527237 FMNL1O95466 1100 aaPredicted RBP21.69■■□□□ 1.06
TRIM3-205ENST00000527237 RASA1P20936 1047 aa21.69■■□□□ 1.06
TRIM3-205ENST00000527237 HOXA7P31268 230 aaPredicted RBP21.69■■□□□ 1.06
TRIM3-205ENST00000527237 NMIQ13287 307 aaPredicted RBP21.69■■□□□ 1.06
TRIM3-205ENST00000527237 KIAA1755Q5JYT7 1200 aa21.69■■□□□ 1.06
TRIM3-205ENST00000527237 POTEEQ6S8J3 1075 aa21.69■■□□□ 1.06
TRIM3-205ENST00000527237 SIAH1Q8IUQ4 282 aa21.69■■□□□ 1.06
TRIM3-205ENST00000527237 TNRC18O15417 2968 aaPredicted RBP21.69■■□□□ 1.06
TRIM3-205ENST00000527237 HERVK_113P62684 666 aa21.68■■□□□ 1.06
TRIM3-205ENST00000527237 ICA1Q05084 483 aa21.68■■□□□ 1.06
TRIM3-205ENST00000527237 FAM110CQ1W6H9 321 aa21.68■■□□□ 1.06
TRIM3-205ENST00000527237 ZNF589Q86UQ0 364 aaPredicted RBP21.68■■□□□ 1.06
TRIM3-205ENST00000527237 P2RX7Q99572 595 aaKnown RBP21.68■■□□□ 1.06
TRIM3-205ENST00000527237 TXNRD2Q9NNW7 524 aa21.68■■□□□ 1.06
TRIM3-205ENST00000527237 ZNFX1Q9P2E3 1918 aaKnown RBP21.68■■□□□ 1.06
TRIM3-205ENST00000527237 MYPNQ86TC9 1320 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 PRKCZQ05513 592 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 CCDC17Q96LX7 622 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.67■■□□□ 1.06
TRIM3-205ENST00000527237 NAPBQ9H115 298 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 SRRDQ9UH36 339 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 TAOK2Q9UL54 1235 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 GABRQQ9UN88 632 aa21.67■■□□□ 1.06
TRIM3-205ENST00000527237 KIAA0100Q14667 2235 aaKnown RBP21.67■■□□□ 1.06
TRIM3-205ENST00000527237 PRDM1O75626 825 aa21.66■■□□□ 1.06
TRIM3-205ENST00000527237 GCLCP48506 637 aaPredicted RBP21.66■■□□□ 1.06
TRIM3-205ENST00000527237 USP14P54578 494 aa21.66■■□□□ 1.06
TRIM3-205ENST00000527237 FCGRTP55899 365 aa21.66■■□□□ 1.06
TRIM3-205ENST00000527237 ARHGEF6Q15052 776 aa21.66■■□□□ 1.06
TRIM3-205ENST00000527237 SH3TC2Q8TF17 1288 aa21.66■■□□□ 1.06
TRIM3-205ENST00000527237 HELLSQ9NRZ9 838 aa21.66■■□□□ 1.06
TRIM3-205ENST00000527237 FRMPD3Q5JV73 1810 aa21.65■■□□□ 1.06
TRIM3-205ENST00000527237 PPARAQ07869 468 aa21.65■■□□□ 1.06
TRIM3-205ENST00000527237 RPAP3Q9H6T3 665 aaPredicted RBP21.65■■□□□ 1.06
TRIM3-205ENST00000527237 PLXNA1Q9UIW2 1896 aa21.64■■□□□ 1.06
TRIM3-205ENST00000527237 GNRH1P01148 92 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 EEF2P13639 858 aaKnown RBP21.64■■□□□ 1.05
TRIM3-205ENST00000527237 GSPT1P15170 499 aaKnown RBP21.64■■□□□ 1.05
TRIM3-205ENST00000527237 SDSP20132 328 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 ATP2B2Q01814 1243 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 SLC9C1Q4G0N8 1177 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 ARMC5Q96C12 935 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 PAGR1Q9BTK6 254 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 NACAP1Q9BZK3 213 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 ARHGEF10LQ9HCE6 1279 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 MORF4L1Q9UBU8 362 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 TACC3Q9Y6A5 838 aa21.64■■□□□ 1.05
TRIM3-205ENST00000527237 CCDC171Q6TFL3 1326 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 TNPO2O14787 897 aaKnown RBP21.63■■□□□ 1.05
TRIM3-205ENST00000527237 MYCP01106 439 aaPredicted RBP21.63■■□□□ 1.05
TRIM3-205ENST00000527237 CTDSPL2Q05D32 466 aa21.63■■□□□ 1.05
TRIM3-205ENST00000527237 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms