RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 MAP3K14Q99558 947 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 TSPY26PQ9H489 355 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 CCDC39Q9UFE4 941 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 CDK5RAP2Q96SN8 1893 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 MYH15Q9Y2K3 1946 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 ZNF500O60304 480 aaPredicted RBP18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 OFD1O75665 1012 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 PLEKHA8P1O95397 391 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 YEATS4O95619 227 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 LIG1P18858 919 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 ME1P48163 572 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 FUT2Q10981 343 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 STK38Q15208 465 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 SF3A1Q15459 793 aaKnown RBP18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 PNMA1Q8ND90 353 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 KCNG4Q8TDN1 519 aa18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 V9GY48 417 aaPredicted RBP18.73■□□□□ 0.59
SNRNP35-204ENST00000527158 RBM5P52756 815 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 NEDD1Q8NHV4 660 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 STX8Q9UNK0 236 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 UVSSAQ2YD98 709 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 LINC00301Q8NCQ3 95 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 PSMD1Q99460 953 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 DDX4Q9NQI0 724 aaKnown RBP18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 DACT1Q9NYF0 836 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 CLIC4Q9Y696 253 aa18.72■□□□□ 0.59
SNRNP35-204ENST00000527158 DDX60LQ5H9U9 1706 aaKnown RBP18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 KCNA3P22001 575 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 ANO1Q5XXA6 986 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 OSBPL5Q9H0X9 879 aaPredicted RBP18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 NUP62CLQ9H1M0 184 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 FOXP1Q9H334 677 aaPredicted RBP18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 SERPINA10Q9UK55 444 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 KCNJ14Q9UNX9 436 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 RRP9O43818 475 aaKnown RBP18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 GNAQP50148 359 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 NOSTRINQ8IVI9 506 aa18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 DIS3L2Q8IYB7 885 aaKnown RBP18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 SRBD1Q8N5C6 995 aaKnown RBP18.71■□□□□ 0.59
SNRNP35-204ENST00000527158 SPTLC2O15270 562 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 HLA-DOAP06340 250 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 POLD1P28340 1107 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 PKN1Q16512 942 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 CCAR1Q8IX12 1150 aaKnown RBP18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 TMEM47Q9BQJ4 181 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 SWAP70Q9UH65 585 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 SERPINB13Q9UIV8 391 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 MYH1P12882 1939 aa18.7■□□□□ 0.58
SNRNP35-204ENST00000527158 BTBD18B2RXH4 712 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 TGFB2P61812 414 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 SOGA3Q5TF21 947 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 FOCADQ5VW36 1801 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 GABPAQ06546 454 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 ADALQ6DHV7 355 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 CCDC73Q6ZRK6 1079 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 TNMDQ9H2S6 317 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 PCDHA7Q9UN72 937 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 ECM29Q5VYK3 1845 aa18.69■□□□□ 0.58
SNRNP35-204ENST00000527158 NR1I2O75469 434 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 GRM4Q14833 912 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 PIM2Q9P1W9 311 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 ZKSCAN5Q9Y2L8 839 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 hCG_1642624A0A1W2PR95 340 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 YDJCA8MPS7 323 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 MAP3K11Q16584 847 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 VPS54Q9P1Q0 977 aa18.68■□□□□ 0.58
SNRNP35-204ENST00000527158 A0A1W2PQ27 194 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 A0A1W2PQ64 194 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 A0A1W2PQD8 194 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 TOP1P11387 765 aaKnown RBP18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 NFIAQ12857 509 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 CAMK4Q16566 473 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 JMYQ8N9B5 988 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 DHX36Q9H2U1 1008 aaKnown RBP18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 CLSTN2Q9H4D0 955 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 BRMS1Q9HCU9 246 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 MYO3BQ8WXR4 1341 aa18.67■□□□□ 0.58
SNRNP35-204ENST00000527158 RILPL1Q5EBL4 403 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 LZTS2Q9BRK4 669 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 IDI2Q9BXS1 227 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 SCN9AQ15858 1988 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 SCG2P13521 617 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 KRT2P35908 639 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 MRPS27Q92552 414 aaKnown RBP18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 ZNF277Q9NRM2 450 aaPredicted RBP18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 MAD2L2Q9UI95 211 aa18.66■□□□□ 0.58
SNRNP35-204ENST00000527158 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
SNRNP35-204ENST00000527158 FAM160A1Q05DH4 1040 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms