RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 ARID3AQ99856 593 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
PTPMT1-204ENST00000527079 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 MAST2Q6P0Q8 1798 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 USP17L21D6R901 530 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 SHISA4Q96DD7 197 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
PTPMT1-204ENST00000527079 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 WTIPA6NIX2 430 aaPredicted RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 PLEKHA8P1O95397 391 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 PLCD1P51178 756 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 MECOMQ03112 1051 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 TBX2Q13207 712 aaPredicted RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 CTCFLQ8NI51 663 aaPredicted RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 ARPP21Q9UBL0 812 aaPredicted RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 SMIM22K7EJ46 135 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 ZSCAN12O43309 604 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 TBC1D9BQ66K14 1250 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 PDILTQ8N807 584 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 TNFRSF25Q93038 417 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 DCP1AQ9NPI6 582 aaPredicted RBP12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 INTS13Q9NVM9 706 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 NARFQ9UHQ1 456 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 PHLPP2Q6ZVD8 1323 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
PTPMT1-204ENST00000527079 TMEM232C9JQI7 657 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 PRDM1O75626 825 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 ETF1P62495 437 aaKnown RBP12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 SPECC1LQ69YQ0 1117 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 GOLGA6L9A6NEM1 432 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 BICDL1Q6ZP65 573 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 ZNF397Q8NF99 534 aaPredicted RBP12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
PTPMT1-204ENST00000527079 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 STX10O60499 249 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 ATP2C1P98194 919 aaPredicted RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 NPY5RQ15761 445 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 TTC38Q5R3I4 469 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 SPTY2D1Q68D10 685 aaPredicted RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 HOMER1Q86YM7 354 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 GRAMD1CQ8IYS0 662 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 DHX58Q96C10 678 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 OGFRQ9NZT2 677 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 SCG2P13521 617 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 NAA30Q147X3 362 aaPredicted RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 TPTE2Q6XPS3 522 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 NBPF5PQ86XG9 351 aaPredicted RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 SRBD1Q8N5C6 995 aaKnown RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 PAGE5Q96GU1 130 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
PTPMT1-204ENST00000527079 A0A1B0GTH6 734 aa12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 KIF5BP33176 963 aa12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 CBX1P83916 185 aa12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 NR1I3Q14994 352 aa12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 PFKFB3Q16875 520 aaPredicted RBP12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 SPATA1Q5VX52 437 aa12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 SRRTQ9BXP5 876 aaKnown RBP12.29□□□□□ -0.44
PTPMT1-204ENST00000527079 A0A087X0B3 334 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 hCG_1642624A0A1W2PR95 340 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 ZPR1O75312 459 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 KLRK1P26718 216 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 CALML3P27482 149 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 DPYDQ12882 1025 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 MED15Q96RN5 788 aa12.28□□□□□ -0.44
PTPMT1-204ENST00000527079 CTAGE1Q96RT6 745 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms