RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ADCY3O60266 1144 aa22.3■■□□□ 1.16
CAPN1-203ENST00000525013 MTFR1Q15390 333 aa22.3■■□□□ 1.16
CAPN1-203ENST00000525013 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
CAPN1-203ENST00000525013 C12orf60Q5U649 245 aa22.3■■□□□ 1.16
CAPN1-203ENST00000525013 SLAIN1Q8ND83 568 aa22.3■■□□□ 1.16
CAPN1-203ENST00000525013 KIAA1683Q9H0B3 1180 aa22.3■■□□□ 1.16
CAPN1-203ENST00000525013 GUCY1A2P33402 732 aa22.29■■□□□ 1.16
CAPN1-203ENST00000525013 UBXN2AP68543 259 aa22.29■■□□□ 1.16
CAPN1-203ENST00000525013 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
CAPN1-203ENST00000525013 MORF4L1Q9UBU8 362 aa22.29■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L15C9J2P7 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L13C9JLJ4 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L11C9JVI0 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L18D6R9N7 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L22D6RA61 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L17D6RBQ6 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L19D6RCP7 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L20D6RJB6 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 SMIM22K7EJ46 135 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 PEX10O60683 326 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 GLRX3O76003 335 aaKnown RBP22.28■■□□□ 1.16
CAPN1-203ENST00000525013 ZFYP08048 801 aaPredicted RBP22.28■■□□□ 1.16
CAPN1-203ENST00000525013 ELNP15502 786 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 MX1P20591 662 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L24Q0WX57 530 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 LRRFIP1Q32MZ4 808 aaKnown RBP22.28■■□□□ 1.16
CAPN1-203ENST00000525013 GPRC5AQ8NFJ5 357 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 APPBP2Q92624 585 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 STRBPQ96SI9 672 aaKnown RBP22.28■■□□□ 1.16
CAPN1-203ENST00000525013 PAGR1Q9BTK6 254 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 BRCA2P51587 3418 aa22.28■■□□□ 1.16
CAPN1-203ENST00000525013 CCL5P13501 91 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 CDK8P49336 464 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 CTR9Q6PD62 1173 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 TMEM179Q6ZVK1 233 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 CCAR1Q8IX12 1150 aaKnown RBP22.27■■□□□ 1.16
CAPN1-203ENST00000525013 PI4K2BQ8TCG2 481 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 OSBP2Q969R2 916 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 TXNRD2Q9NNW7 524 aa22.27■■□□□ 1.16
CAPN1-203ENST00000525013 MKI67P46013 3256 aaKnown RBP22.26■■□□□ 1.15
CAPN1-203ENST00000525013 AKR1B1P15121 316 aa22.26■■□□□ 1.15
CAPN1-203ENST00000525013 VCAM1P19320 739 aa22.26■■□□□ 1.15
CAPN1-203ENST00000525013 HDAC1Q13547 482 aaPredicted RBP22.26■■□□□ 1.15
CAPN1-203ENST00000525013 IRF5Q13568 498 aa22.26■■□□□ 1.15
CAPN1-203ENST00000525013 GTF3C2Q8WUA4 911 aaPredicted RBP22.26■■□□□ 1.15
CAPN1-203ENST00000525013 GCC1Q96CN9 775 aa22.26■■□□□ 1.15
CAPN1-203ENST00000525013 RNF208Q9H0X6 261 aa22.26■■□□□ 1.15
CAPN1-203ENST00000525013 RBPJLQ9UBG7 517 aa22.26■■□□□ 1.15
CAPN1-203ENST00000525013 C16orf86Q6ZW13 317 aa22.25■■□□□ 1.15
CAPN1-203ENST00000525013 PXYLP1Q8TE99 480 aa22.25■■□□□ 1.15
CAPN1-203ENST00000525013 CCDC17Q96LX7 622 aa22.25■■□□□ 1.15
CAPN1-203ENST00000525013 FSD1Q9BTV5 496 aa22.25■■□□□ 1.15
CAPN1-203ENST00000525013 RPAP3Q9H6T3 665 aaPredicted RBP22.25■■□□□ 1.15
CAPN1-203ENST00000525013 A0A1W2PRG0 241 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 GSG1L2A8MUP6 293 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 M0R2C6 588 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 GPAA1O43292 621 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 APPP05067 770 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 INHAP05111 366 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 ERVK-9P63128 1117 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 ERVK-24P63145 666 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 CATSPERGQ6ZRH7 1159 aa22.24■■□□□ 1.15
CAPN1-203ENST00000525013 ARPP21Q9UBL0 812 aaPredicted RBP22.24■■□□□ 1.15
CAPN1-203ENST00000525013 MINDY4BA8MYZ0 360 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 ICA1Q05084 483 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 AAMPQ13685 434 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 Q3C1V9 767 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 CLEC10AQ8IUN9 316 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 UNC93B1Q9H1C4 597 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
CAPN1-203ENST00000525013 CWC22Q9HCG8 908 aaKnown RBP22.23■■□□□ 1.15
CAPN1-203ENST00000525013 GJB1P08034 283 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 GNAT2P19087 354 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 MAPK4P31152 587 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 ATP2B2Q01814 1243 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 STK11IPQ8N1F8 1099 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 GJD2Q9UKL4 321 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 RABGAP1Q9Y3P9 1069 aa22.22■■□□□ 1.15
CAPN1-203ENST00000525013 TDO2P48775 406 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 SBK1Q52WX2 424 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 PRPF38BQ5VTL8 546 aaKnown RBP22.21■■□□□ 1.15
CAPN1-203ENST00000525013 POTEEQ6S8J3 1075 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 NKX2-3Q8TAU0 364 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 SEC62Q99442 399 aaKnown RBP22.21■■□□□ 1.15
CAPN1-203ENST00000525013 TANGO6Q9C0B7 1094 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 PORCNQ9H237 461 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 PLXNB2O15031 1838 aa22.21■■□□□ 1.15
CAPN1-203ENST00000525013 CEP290O15078 2479 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 CYP2B6P20813 491 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 CCNA1P78396 465 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 SIAH1Q8IUQ4 282 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 NUDT12Q9BQG2 462 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
CAPN1-203ENST00000525013 MKNK2Q9HBH9 465 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 SALL3Q9BXA9 1300 aa22.2■■□□□ 1.14
CAPN1-203ENST00000525013 GJA8P48165 433 aa22.19■■□□□ 1.14
CAPN1-203ENST00000525013 WDR78Q5VTH9 848 aa22.19■■□□□ 1.14
CAPN1-203ENST00000525013 SPICE1Q8N0Z3 855 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms