RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 LIFRP42702 1097 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 NR5A1Q13285 461 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 MSL3Q8N5Y2 521 aaKnown RBP20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 IPO4Q8TEX9 1081 aaKnown RBP20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 ZFP91Q96JP5 570 aaPredicted RBP20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 CDC5LQ99459 802 aaKnown RBP20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 FOXP1Q9H334 677 aaPredicted RBP20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 SPATA31A5Q5VU36 1347 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 SPATA31A7Q8IWB4 1347 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 ATRNO75882 1429 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 SYNRGQ9UMZ2 1314 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 VSNL1P62760 191 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 TUBB4BP68371 445 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 IFIT5Q13325 482 aaKnown RBP20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 METTL24Q5JXM2 366 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 ACRBPQ8NEB7 543 aa20.67■□□□□ 0.9
PCDHB18P-201ENST00000524813 A0A0G2JS52 829 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 TNNT3P45378 269 aaPredicted RBP20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 UBE3CQ15386 1083 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 ISCA1Q9BUE6 129 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 IVLP07476 585 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 AFMP43652 599 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 CTDSPL2Q05D32 466 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 DDB1Q16531 1140 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 TRIM22Q8IYM9 498 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 TTF2Q9UNY4 1162 aaKnown RBP20.66■□□□□ 0.9
PCDHB18P-201ENST00000524813 ABL1P00519 1130 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 HSPA1LP34931 641 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 FXR1P51114 621 aaKnown RBP eCLIP20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CUL4BQ13620 913 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CASP8Q14790 479 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CDKAL1Q5VV42 579 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CTAGE1Q96RT6 745 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 NAPGQ99747 312 aaPredicted RBP20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CEP131Q9UPN4 1083 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CTAGE15A4D2H0 777 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 GYPCP04921 128 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CTAGE8P0CG41 777 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 PDE6AP16499 860 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 FILIP1LQ4L180 1135 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CT47A1Q5JQC4 288 aaPredicted RBP20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CTAGE6Q86UF2 777 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CNGA4Q8IV77 575 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 CTAGE4Q8IX94 777 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 PIGBQ92521 554 aa20.65■□□□□ 0.9
PCDHB18P-201ENST00000524813 RIC1Q4ADV7 1423 aa20.64■□□□□ 0.9
PCDHB18P-201ENST00000524813 CASP1P29466 404 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 CMTR1Q8N1G2 835 aaKnown RBP20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 OXER1Q8TDS5 423 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 CCDC102AQ96A19 550 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 AIDAQ96BJ3 306 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 STRBPQ96SI9 672 aaKnown RBP20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 WWC3Q9ULE0 1092 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 THRAP3Q9Y2W1 955 aaKnown RBP20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 TACC3Q9Y6A5 838 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 A0A087X0B3 334 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 TCIRG1Q13488 830 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 WHAMMP3Q1A5X7 153 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 SMYD4Q8IYR2 804 aaPredicted RBP20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 GBP3Q9H0R5 595 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 CABP5Q9NP86 173 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.89
PCDHB18P-201ENST00000524813 BCL9LQ86UU0 1499 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 RTN1Q16799 776 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 FOXR1Q6PIV2 292 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 CCDC51Q96ER9 411 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 RIPOR2Q9Y4F9 1068 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 AKAP11Q9UKA4 1901 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 CSF1RP07333 972 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 HSP90B2PQ58FF3 399 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 FAM71BQ8TC56 605 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 PAGE5Q96GU1 130 aa20.63■□□□□ 0.89
PCDHB18P-201ENST00000524813 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 PHACTR2O75167 634 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 RPS6KA5O75582 802 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 DEXIO95424 95 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 FECHP22830 423 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 ERVK-24P63145 666 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 LDHAL6AQ6ZMR3 332 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 NOA1Q8NC60 698 aaKnown RBP20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 EPSTI1Q96J88 318 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 ZKSCAN3Q9BRR0 538 aa20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 CDCA7Q9BWT1 371 aaPredicted RBP20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 EPB41L4AQ9HCS5 686 aaPredicted RBP20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 ZNF330Q9Y3S2 320 aaPredicted RBP20.62■□□□□ 0.89
PCDHB18P-201ENST00000524813 ALX1Q15699 326 aa20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 TMTC1Q8IUR5 882 aa20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 IFNL3Q8IZI9 196 aa20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 ZNF512BQ96KM6 892 aaPredicted RBP20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 NAPBQ9H115 298 aa20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 PPP1R3GB7ZBB8 358 aa20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 SEMA3EO15041 775 aa20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 CCT6AP40227 531 aaKnown RBP20.61■□□□□ 0.89
PCDHB18P-201ENST00000524813 ARHGAP25P42331 645 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms