RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 ADAMTS3O15072 1205 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 MFAP3LO75121 409 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 FMNL1O95466 1100 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-202ENST00000524773 DHX8Q14562 1220 aaKnown RBP14.94□□□□□ -0.02
CAPN1-202ENST00000524773 RTN1Q16799 776 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 HDXQ7Z353 690 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 IFNL3Q8IZI9 196 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 ADD3Q9UEY8 706 aaKnown RBP14.94□□□□□ -0.02
CAPN1-202ENST00000524773 PPARDQ03181 441 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 LEKR1Q6ZMV7 388 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 PAGE5Q96GU1 130 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 PRDM11Q9NQV5 511 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 COL18A1P39060 1754 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 MINDY4BA8MYZ0 360 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 N4BP3O15049 544 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 BRD3Q15059 726 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 FAM204AQ9H8W3 233 aa14.94□□□□□ -0.02
CAPN1-202ENST00000524773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■□□□ 11.9
CAPN1-202ENST00000524773 MYO5AQ9Y4I1 1855 aaKnown RBP14.94□□□□□ -0.02
CAPN1-202ENST00000524773 TCIRG1Q13488 830 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 TTLL11Q8NHH1 800 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 POLD4Q9HCU8 107 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 CYP2D7A0A087X1C5 515 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 TDO2P48775 406 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 EVX2Q03828 476 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 SLC4A8Q2Y0W8 1093 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 PLIN2Q99541 437 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 RIPOR2Q9Y4F9 1068 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 PLEKHG2Q9H7P9 1386 aa14.93□□□□□ -0.02
CAPN1-202ENST00000524773 CTAGE15A4D2H0 777 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 CTAGE8P0CG41 777 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 KRT31Q15323 416 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 CTAGE6Q86UF2 777 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 CTAGE4Q8IX94 777 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 LCORLQ8N3X6 602 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 PANX2Q96RD6 677 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 TRIM49BA6NDI0 452 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 PPP1R3GB7ZBB8 358 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 ARHGAP25P42331 645 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 CUL4BQ13620 913 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 NT5DC1Q5TFE4 455 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 SPATA1Q5VX52 437 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 TTC19Q6DKK2 380 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-202ENST00000524773 MFSD6Q6ZSS7 791 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 TRIM22Q8IYM9 498 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 EHD4Q9H223 541 aa14.92□□□□□ -0.02
CAPN1-202ENST00000524773 ZNF185O15231 689 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 VEGFAP15692 232 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 WTAPQ15007 396 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 KCTD19Q17RG1 926 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 RRAGBQ5VZM2 374 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 RASGRP2Q7LDG7 609 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 TMEM87BQ96K49 555 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 STRN4Q9NRL3 753 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 SRPRBQ9Y5M8 271 aaKnown RBP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 WTIPA6NIX2 430 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 IFNAR1P17181 557 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 LRRC31Q6UY01 552 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 DNAJC10Q8IXB1 793 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 CRACR2BQ8N4Y2 399 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 CEP112Q8N8E3 955 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 NAPGQ99747 312 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-202ENST00000524773 DACH1Q9UI36 760 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 GDAQ9Y2T3 454 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 TCRBV5S4A2TA0A5A2 114 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 PLEKHA8P1O95397 391 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 KRT9P35527 623 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 RILPL1Q5EBL4 403 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 MMS19Q96T76 1030 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 RIC1Q4ADV7 1423 aa14.91□□□□□ -0.02
CAPN1-202ENST00000524773 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 MYBL2P10244 700 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 PBX1P40424 430 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 HSP90B2PQ58FF3 399 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 PACS2Q86VP3 889 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
CAPN1-202ENST00000524773 ISCA1Q9BUE6 129 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 ABHD10Q9NUJ1 306 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 CWC15Q9P013 229 aaKnown RBP14.9□□□□□ -0.02
CAPN1-202ENST00000524773 TBC1D2BQ9UPU7 963 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 REXO2Q9Y3B8 237 aaKnown RBP14.9□□□□□ -0.02
CAPN1-202ENST00000524773 SLC4A4Q9Y6R1 1079 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 DUSP10Q9Y6W6 482 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 V9GY48 417 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-202ENST00000524773 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 ATP1A1P05023 1023 aaKnown RBP14.9□□□□□ -0.02
CAPN1-202ENST00000524773 AKNAD1Q5T1N1 836 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 RAB21Q9UL25 225 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 MYO6Q9UM54 1294 aa14.9□□□□□ -0.02
CAPN1-202ENST00000524773 MYH8P13535 1937 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 RNF40O75150 1001 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 TOM1L2Q6ZVM7 507 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 MSANTD4Q8NCY6 345 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
CAPN1-202ENST00000524773 ERCC3P19447 782 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms