RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 ZNF827Q17R98 1081 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 SPECC1Q5M775 1068 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 TRIM65Q6PJ69 517 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 TMTC3Q6ZXV5 915 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 GRAMD1CQ8IYS0 662 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 ENAHQ8N8S7 591 aaPredicted RBP10.18□□□□□ -0.78
PKP3-202ENST00000524646 SDR42E1Q8WUS8 393 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 SHISA4Q96DD7 197 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 ZSCAN10Q96SZ4 725 aaPredicted RBP10.18□□□□□ -0.78
PKP3-202ENST00000524646 BAG1Q99933 345 aaPredicted RBP10.18□□□□□ -0.78
PKP3-202ENST00000524646 CSRNP2Q9H175 543 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 FAM53CQ9NYF3 392 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 VPS54Q9P1Q0 977 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 PPP2R2CQ9Y2T4 447 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 LY75O60449 1722 aa10.18□□□□□ -0.78
PKP3-202ENST00000524646 SPATA31A1Q5TZJ5 1347 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 LOC102724428A0A0B4J2F2 783 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 A0A1B0GTH6 734 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 FAM205CA6NFA0 338 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 MINDY4BA8MYZ0 360 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 RGL2O15211 777 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 ORC4O43929 436 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 STX10O60499 249 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 FGRP09769 529 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 ATP6V1AP38606 617 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 SIK1P57059 783 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 GOLGA8FQ08AF8 430 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 GOLGA8DPQ0D2H9 430 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 ITPK1Q13572 414 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 PKN1Q16512 942 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 TTC38Q5R3I4 469 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 IFIT1BQ5T764 474 aaKnown RBP10.17□□□□□ -0.78
PKP3-202ENST00000524646 TMED8Q6PL24 325 aaPredicted RBP10.17□□□□□ -0.78
PKP3-202ENST00000524646 SH3RF1Q7Z6J0 888 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 CREBRFQ8IUR6 639 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 ANKRD18AQ8IVF6 992 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 TC2NQ8N9U0 490 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 LRRN4CLQ8ND94 238 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 MNS1Q8NEH6 495 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 TNFRSF25Q93038 417 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 DHX58Q96C10 678 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 CABP5Q9NP86 173 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.17□□□□□ -0.78
PKP3-202ENST00000524646 THRAP3Q9Y2W1 955 aaKnown RBP10.17□□□□□ -0.78
PKP3-202ENST00000524646 PARP3Q9Y6F1 533 aa10.17□□□□□ -0.78
PKP3-202ENST00000524646 MYH7BA7E2Y1 1941 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 A0A087X0B3 334 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 KIF20AO95235 890 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 PLEKHA8P1O95397 391 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 SLFN14P0C7P3 912 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 ATP2C1P98194 919 aaPredicted RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 CUL4BQ13620 913 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 SF3B3Q15393 1217 aaKnown RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 ERCC6LQ2NKX8 1250 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 CDKAL1Q5VV42 579 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 SPATA1Q5VX52 437 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 IQCA1Q86XH1 822 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 PDILTQ8N807 584 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 PANX2Q96RD6 677 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 PYM1Q9BRP8 204 aaKnown RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 ARGLU1Q9NWB6 273 aaPredicted RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 ABCF2Q9UG63 623 aa10.16□□□□□ -0.78
PKP3-202ENST00000524646 BAZ2BQ9UIF8 2168 aaKnown RBP10.16□□□□□ -0.78
PKP3-202ENST00000524646 ITIH6Q6UXX5 1313 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 EFCAB8A8MWE9 144 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 FANCGO15287 622 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 URI1O94763 535 aaPredicted RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 TPM1P09493 284 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 ATP2B1P20020 1258 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 CDK11BP21127 795 aaKnown RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 GYG1P46976 350 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 TRAPPC10P48553 1259 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 CLCN6P51797 869 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 DPYDQ12882 1025 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 NPY5RQ15761 445 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 DDB1Q16531 1140 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 ARHGAP29Q52LW3 1261 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 USP49Q70CQ1 688 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 APTXQ7Z2E3 356 aaKnown RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 UBXN4Q92575 508 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 KIFC2Q96AC6 838 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 PAGE5Q96GU1 130 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 MED15Q96RN5 788 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 NAA15Q9BXJ9 866 aaKnown RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 BCL11BQ9C0K0 894 aaPredicted RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 ZNF446Q9NWS9 450 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 IQSEC3Q9UPP2 1182 aaPredicted RBP10.15□□□□□ -0.78
PKP3-202ENST00000524646 LRRC37AA6NMS7 1700 aa10.15□□□□□ -0.78
PKP3-202ENST00000524646 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 XDHP47989 1333 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 AKR1B15C9JRZ8 316 aaPredicted RBP10.14□□□□□ -0.79
PKP3-202ENST00000524646 ZBTB22O15209 634 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 MFAP3LO75121 409 aa10.14□□□□□ -0.79
PKP3-202ENST00000524646 PRDM1O75626 825 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms