RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
CLN8-207ENST00000524258 INCENPQ9NQS7 918 aa14.28□□□□□ -0.12
CLN8-207ENST00000524258 CASP8AP2Q9UKL3 1982 aa14.28□□□□□ -0.12
CLN8-207ENST00000524258 AGTPBP1Q9UPW5 1226 aa14.28□□□□□ -0.12
CLN8-207ENST00000524258 C19orf81C9J6K1 198 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 USP17L10C9JJH3 530 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 TLR2O60603 784 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 KIAA1755Q5JYT7 1200 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 NKX2-3Q8TAU0 364 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 KIAA1683Q9H0B3 1180 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 DIAPH3Q9NSV4 1193 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.13
CLN8-207ENST00000524258 HTTP42858 3142 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 GREB1LQ9C091 1923 aaPredicted RBP14.26□□□□□ -0.13
CLN8-207ENST00000524258 CYP2C8P10632 490 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 HOXA7P31268 230 aaPredicted RBP14.26□□□□□ -0.13
CLN8-207ENST00000524258 CTDSPL2Q05D32 466 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 GADL1Q6ZQY3 521 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 CABP5Q9NP86 173 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 LOC285556D6RIA3 1793 aa14.26□□□□□ -0.13
CLN8-207ENST00000524258 FKTNO75072 461 aa14.25□□□□□ -0.13
CLN8-207ENST00000524258 PRDM1O75626 825 aa14.25□□□□□ -0.13
CLN8-207ENST00000524258 BCRP11274 1271 aa14.25□□□□□ -0.13
CLN8-207ENST00000524258 BMP2KLQ5H9B9 411 aa14.25□□□□□ -0.13
CLN8-207ENST00000524258 STK11IPQ8N1F8 1099 aa14.25□□□□□ -0.13
CLN8-207ENST00000524258 DSCC1Q9BVC3 393 aa14.25□□□□□ -0.13
CLN8-207ENST00000524258 PLIN4Q96Q06 1357 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
CLN8-207ENST00000524258 SGSM2O43147 1006 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 CTGFP29279 349 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 NOVP48745 357 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 USP17L2Q6R6M4 530 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 NEDD1Q8NHV4 660 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 ASCC2Q9H1I8 757 aaPredicted RBP14.24□□□□□ -0.13
CLN8-207ENST00000524258 TMX2Q9Y320 296 aa14.24□□□□□ -0.13
CLN8-207ENST00000524258 RAD50Q92878 1312 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 ORC4O43929 436 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 EEF2P13639 858 aaKnown RBP14.23□□□□□ -0.13
CLN8-207ENST00000524258 MFAP1P55081 439 aaKnown RBP14.23□□□□□ -0.13
CLN8-207ENST00000524258 SP3Q02447 781 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 PTH1RQ03431 593 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 ICA1Q05084 483 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 TBC1D10CQ8IV04 446 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
CLN8-207ENST00000524258 KANSL2Q9H9L4 492 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 MKNK2Q9HBH9 465 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 NYAP2Q9P242 653 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 CPA4Q9UI42 421 aa14.23□□□□□ -0.13
CLN8-207ENST00000524258 VCAM1P19320 739 aa14.22□□□□□ -0.13
CLN8-207ENST00000524258 USP14P54578 494 aa14.22□□□□□ -0.13
CLN8-207ENST00000524258 MKL1Q969V6 931 aa14.22□□□□□ -0.13
CLN8-207ENST00000524258 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
CLN8-207ENST00000524258 IL17RBQ9NRM6 502 aa14.22□□□□□ -0.13
CLN8-207ENST00000524258 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
CLN8-207ENST00000524258 HAND2P61296 217 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 PDE4BQ07343 736 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 ZYXQ15942 572 aaKnown RBP14.21□□□□□ -0.13
CLN8-207ENST00000524258 FAM47AQ5JRC9 791 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 CTU1Q7Z7A3 348 aaKnown RBP14.21□□□□□ -0.13
CLN8-207ENST00000524258 ZNF444Q8N0Y2 327 aaPredicted RBP14.21□□□□□ -0.13
CLN8-207ENST00000524258 CD99L2Q8TCZ2 262 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 STAG1Q8WVM7 1258 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 CEP95Q96GE4 821 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 ARHGAP39Q9C0H5 1083 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 TMOD4Q9NZQ9 345 aa14.21□□□□□ -0.13
CLN8-207ENST00000524258 LACTBP83111 547 aaPredicted RBP14.2□□□□□ -0.14
CLN8-207ENST00000524258 TFAP4Q01664 338 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 AKNAD1Q5T1N1 836 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 OTOP1Q7RTM1 612 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 MAP4K1Q92918 833 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 ESYT1Q9BSJ8 1104 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 MCOLN1Q9GZU1 580 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 ZNF287Q9HBT7 754 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 TXNRD2Q9NNW7 524 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 MORF4L1Q9UBU8 362 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
CLN8-207ENST00000524258 USP17L15C9J2P7 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L13C9JLJ4 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L11C9JVI0 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L18D6R9N7 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L22D6RA61 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L17D6RBQ6 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L19D6RCP7 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L20D6RJB6 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 NMT2O60551 498 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 PEX10O60683 326 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 CNMDO75829 334 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 SLC3A2P08195 630 aaKnown RBP14.19□□□□□ -0.14
CLN8-207ENST00000524258 HERVK_113P62684 666 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 USP17L24Q0WX57 530 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 PABPC4Q13310 644 aaKnown RBP eCLIP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms