RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	GADL1	Q6ZQY3	521 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TTLL6	Q8N841	843 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	ANKS4B	Q8N8V4	417 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	ZMYND15	Q9H091	742 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SEC63	Q9UGP8	760 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	RASAL2	Q9UJF2	1139 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	RTL9	Q8NET4	1388 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	RIC1	Q4ADV7	1423 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	KLF18	A0A0U1RQI7	1052 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	GOLGA8A	A7E2F4	631 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	PDE6A	P16499	860 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	CTNNA2	P26232	953 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	ALDH3A1	P30838	453 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	DDIT3	P35638	169 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	METAP2	P50579	478 aa	Known RBP eCLIP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	CCT2	P78371	535 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SPAG1	Q07617	926 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	DLGAP5	Q15398	846 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TSGA10IP	Q3SY00	556 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	CCDC14	Q49A88	953 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TMEM67	Q5HYA8	995 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	RNF187	Q5TA31	235 aa	Predicted RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	LRSAM1	Q6UWE0	723 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	KCNB2	Q92953	911 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	GTF3C6	Q969F1	213 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SLC10A4	Q96EP9	437 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	IL17RA	Q96F46	866 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TCEANC2	Q96MN5	208 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	LRRC2	Q9BYS8	371 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	ARMT1	Q9H993	441 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SWAP70	Q9UH65	585 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SRP68	Q9UHB9	627 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	USP25	Q9UHP3	1055 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	NSFL1C	Q9UNZ2	370 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	2.92	□□□□□ -1.94	2e-7	■■□□□ 13.2
PCM1-222	ENST00000524226	MINDY4B	A8MYZ0	360 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	IFIT3	O14879	490 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	HSF2BP	O75031	334 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SYT1	P21579	422 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	BCAM	P50895	628 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	RPS8	P62241	208 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	UBE2H	P62256	183 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	SSRP1	Q08945	709 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	ZSCAN23	Q3MJ62	389 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	C10orf67	Q8IYJ2	551 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	FAM200A	Q8TCP9	573 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TIGD1	Q96MW7	591 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	NAP1L3	Q99457	506 aa	Predicted RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	CCDC113	Q9H0I3	377 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	IL25	Q9H293	177 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	PIH1D3	Q9NQM4	214 aa	Known RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TPCN1	Q9ULQ1	816 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	COMMD10	Q9Y6G5	202 aa		2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	RPAP1	Q9BWH6	1393 aa	Predicted RBP	2.92	□□□□□ -1.94
PCM1-222	ENST00000524226	PFKFB2	O60825	505 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	TACC1	O75410	805 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	VIM	P08670	466 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CYP21A2	P08686	494 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	PLCG2	P16885	1265 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	KCNQ4	P56696	695 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CCNA1	P78396	465 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CCDC178	Q5BJE1	867 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	FAM182B	Q5T319	152 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CEP135	Q66GS9	1140 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CC2D2B	Q6DHV5	1058 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	TMTC2	Q8N394	836 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	MIGA1	Q8NAN2	632 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	PPP1R14C	Q8TAE6	165 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	OSBP2	Q969R2	916 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	C8orf76	Q96K31	380 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	TMEM87B	Q96K49	555 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	IQCG	Q9H095	443 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CNPY2	Q9Y2B0	182 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	PTPDC1	A2A3K4	754 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	PDE4B	Q07343	736 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	WTAP	Q15007	396 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CROCCP2	Q86T23	111 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CERS3	Q8IU89	383 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	NUP133	Q8WUM0	1156 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	ARHGEF1	Q92888	912 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	ZNF274	Q96GC6	653 aa	Predicted RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CTAGE1	Q96RT6	745 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	HINFP	Q9BQA5	517 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	PUS7L	Q9H0K6	701 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	RMND1	Q9NWS8	449 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	STIM2	Q9P246	746 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	FAM184B	Q9ULE4	1060 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	BCL9L	Q86UU0	1499 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	XDH	P47989	1333 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	KAT6B	Q8WYB5	2073 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	NHS	Q6T4R5	1651 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	CYP2E1	P05181	493 aa	Predicted RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	SSB	P05455	408 aa	Known RBP eCLIP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	LDHB	P07195	334 aa	Known RBP	2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	GRAP	Q13588	217 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	RASGRF1	Q13972	1273 aa		2.91	□□□□□ -1.94
PCM1-222	ENST00000524226	MAP7	Q14244	749 aa		2.91	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms