RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 MCAMP43121 646 aa14.31□□□□□ -0.12
SDCBP-211ENST00000523441 CCNA1P78396 465 aa14.31□□□□□ -0.12
SDCBP-211ENST00000523441 RAB3GAP1Q15042 981 aa14.31□□□□□ -0.12
SDCBP-211ENST00000523441 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
SDCBP-211ENST00000523441 SH3RF1Q7Z6J0 888 aa14.31□□□□□ -0.12
SDCBP-211ENST00000523441 LPAR1Q92633 364 aa14.31□□□□□ -0.12
SDCBP-211ENST00000523441 DHX36Q9H2U1 1008 aaKnown RBP14.31□□□□□ -0.12
SDCBP-211ENST00000523441 NOB1Q9ULX3 412 aaKnown RBP14.31□□□□□ -0.12
SDCBP-211ENST00000523441 FLT1P17948 1338 aa14.31□□□□□ -0.12
SDCBP-211ENST00000523441 BAG3O95817 575 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 PTPREP23469 700 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 ADCYAP1R1P41586 468 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 DYNLL1P63167 89 aaKnown RBP14.3□□□□□ -0.12
SDCBP-211ENST00000523441 SLC39A5Q6ZMH5 540 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 DPP9Q86TI2 863 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 BTBD7Q9P203 1132 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 RABGAP1Q9Y3P9 1069 aa14.3□□□□□ -0.12
SDCBP-211ENST00000523441 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L15C9J2P7 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L13C9JLJ4 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L11C9JVI0 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L18D6R9N7 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L22D6RA61 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L17D6RBQ6 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L19D6RCP7 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L20D6RJB6 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 HLA-DOAP06340 250 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 USP17L24Q0WX57 530 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 TTC39AQ5SRH9 613 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 GTF3C2Q8WUA4 911 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-211ENST00000523441 SYMPKQ92797 1274 aaKnown RBP14.29□□□□□ -0.12
SDCBP-211ENST00000523441 CDH23Q9H251 3354 aa14.29□□□□□ -0.12
SDCBP-211ENST00000523441 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
SDCBP-211ENST00000523441 MSCO60682 206 aa14.28□□□□□ -0.12
SDCBP-211ENST00000523441 MAP4K4O95819 1239 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-211ENST00000523441 FOXP4Q8IVH2 680 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-211ENST00000523441 USP38Q8NB14 1042 aa14.28□□□□□ -0.12
SDCBP-211ENST00000523441 ARRDC4Q8NCT1 418 aa14.28□□□□□ -0.12
SDCBP-211ENST00000523441 ACER1Q8TDN7 264 aa14.28□□□□□ -0.12
SDCBP-211ENST00000523441 TRIM43Q96BQ3 446 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-211ENST00000523441 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
SDCBP-211ENST00000523441 PDLIM7Q9NR12 457 aa14.28□□□□□ -0.12
SDCBP-211ENST00000523441 CYBAP13498 195 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 PLCG2P16885 1265 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 VCAM1P19320 739 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 ARID4AP29374 1257 aaPredicted RBP14.27□□□□□ -0.13
SDCBP-211ENST00000523441 PLS1Q14651 629 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 MIGA1Q8NAN2 632 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 CDCA7LQ96GN5 454 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 RPAP3Q9H6T3 665 aaPredicted RBP14.27□□□□□ -0.13
SDCBP-211ENST00000523441 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.13
SDCBP-211ENST00000523441 ZNF521Q96K83 1311 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 E9PSI1 815 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 UQCRFS1P1P0C7P4 283 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 ADORA2AP29274 412 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 USP5P45974 858 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 EPHB4P54760 987 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
SDCBP-211ENST00000523441 TLE2Q04725 743 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
SDCBP-211ENST00000523441 GRB14Q14449 540 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 GRIN2CQ14957 1233 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
SDCBP-211ENST00000523441 SMCHD1A6NHR9 2005 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 ZNFX1Q9P2E3 1918 aaKnown RBP14.25□□□□□ -0.13
SDCBP-211ENST00000523441 TMEM265A0A087WTH1 108 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 MPHOSPH10O00566 681 aaKnown RBP14.25□□□□□ -0.13
SDCBP-211ENST00000523441 PQBP1O60828 265 aaKnown RBP14.25□□□□□ -0.13
SDCBP-211ENST00000523441 CYP7A1P22680 504 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 ITGB8P26012 769 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 ATF7IPQ6VMQ6 1270 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
SDCBP-211ENST00000523441 TTC28Q96AY4 2481 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 TNFRSF10AO00220 468 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 CYP2E1P05181 493 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 RAG1P15918 1043 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 OS9Q13438 667 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 CCDC85BQ15834 202 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 ABCB5Q2M3G0 1257 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 CERKLQ49MI3 558 aaPredicted RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 FAM47AQ5JRC9 791 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 MOV10L1Q9BXT6 1211 aaKnown RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 API5Q9BZZ5 524 aaKnown RBP14.24□□□□□ -0.13
SDCBP-211ENST00000523441 PLXNA1Q9UIW2 1896 aa14.24□□□□□ -0.13
SDCBP-211ENST00000523441 COBLO75128 1261 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 IDH1O75874 414 aaKnown RBP14.23□□□□□ -0.13
SDCBP-211ENST00000523441 ZAP70P43403 619 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 USP14P54578 494 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 LRRC41Q15345 812 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 DBNDD2Q9BQY9 259 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
SDCBP-211ENST00000523441 PIH1D3Q9NQM4 214 aaKnown RBP14.23□□□□□ -0.13
SDCBP-211ENST00000523441 GINM1Q9NU53 330 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms