RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ARMC9Q7Z3E5 817 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 CCDC146Q8IYE0 955 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 ZBTB38Q8NAP3 1195 aaPredicted RBP8.01□□□□□ -1.13
PABPC1-220ENST00000522658 TBC1D16Q8TBP0 767 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 PRM3Q9NNZ6 103 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 MYOZ2Q9NPC6 264 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 HCN2Q9UL51 889 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 MYO3BQ8WXR4 1341 aa8.01□□□□□ -1.13
PABPC1-220ENST00000522658 USP17L3A6NCW0 530 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 USP17L4A6NCW7 530 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 EGFRP00533 1210 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 VIL1P09327 827 aaKnown RBP8□□□□□ -1.13
PABPC1-220ENST00000522658 BMP4P12644 408 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 ATP2B4P23634 1241 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 KCNJ4P48050 445 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 GDF10P55107 478 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 RALBP1Q15311 655 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 USP17L1Q7RTZ2 530 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
PABPC1-220ENST00000522658 CSRNP1Q96S65 589 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 MYD88Q99836 296 aa8□□□□□ -1.13
PABPC1-220ENST00000522658 PDE8AO60658 829 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 PLA2G4AP47712 749 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 NEXNQ0ZGT2 675 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 KRT24Q2M2I5 525 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 DUSP27Q5VZP5 1158 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 DLK2Q6UY11 383 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 TBC1D9Q6ZT07 1266 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 APOBEC3FQ8IUX4 373 aaKnown RBP7.99□□□□□ -1.13
PABPC1-220ENST00000522658 C1orf216Q8TAB5 229 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 RUNDC1Q96C34 613 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 ISCA1Q9BUE6 129 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 ZCCHC2Q9C0B9 1178 aaKnown RBP7.99□□□□□ -1.13
PABPC1-220ENST00000522658 CWC25Q9NXE8 425 aaPredicted RBP7.99□□□□□ -1.13
PABPC1-220ENST00000522658 PODXL2Q9NZ53 605 aa7.99□□□□□ -1.13
PABPC1-220ENST00000522658 FKTNO75072 461 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 TBC1D8O95759 1140 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 ARAFP10398 606 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 EPXP11678 715 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 IGHMBP2P38935 993 aaKnown RBP7.98□□□□□ -1.13
PABPC1-220ENST00000522658 SMTNP53814 917 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 ZNF280AP59817 542 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-220ENST00000522658 FBXO46Q6PJ61 603 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-220ENST00000522658 NLRP8Q86W28 1048 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 PLPP7Q8NBV4 271 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 CCDC191Q8NCU4 936 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 ZNF296Q8WUU4 475 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-220ENST00000522658 SUV39H2Q9H5I1 410 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 SEC31BQ9NQW1 1179 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-220ENST00000522658 PCDHGC4Q9Y5F7 938 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 MYBBP1AQ9BQG0 1328 aaKnown RBP7.98□□□□□ -1.13
PABPC1-220ENST00000522658 TAF1P21675 1872 aa7.98□□□□□ -1.13
PABPC1-220ENST00000522658 MED23Q9ULK4 1368 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 ZNF609O15014 1411 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 TMEM229AB2RXF0 380 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 UBE2Q2LH0YL09 131 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 CHL1O00533 1208 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 MYO1BO43795 1136 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 PCCAP05165 728 aaPredicted RBP7.97□□□□□ -1.13
PABPC1-220ENST00000522658 MMP14P50281 582 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 TRIM28Q13263 835 aaKnown RBP7.97□□□□□ -1.13
PABPC1-220ENST00000522658 PRKG1Q13976 671 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 MTFR1Q15390 333 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 OTUD7BQ6GQQ9 843 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 FIGNL1Q6PIW4 674 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 BTBD6Q96KE9 485 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 MPHOSPH8Q99549 860 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 STK31Q9BXU1 1019 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 NIFKQ9BYG3 293 aaKnown RBP7.97□□□□□ -1.13
PABPC1-220ENST00000522658 KCNQ5Q9NR82 932 aa7.97□□□□□ -1.13
PABPC1-220ENST00000522658 ASTN2O75129 1339 aaPredicted RBP7.97□□□□□ -1.13
PABPC1-220ENST00000522658 PPP1R12BO60237 982 aaPredicted RBP7.96□□□□□ -1.14
PABPC1-220ENST00000522658 CTSWP56202 376 aa7.96□□□□□ -1.14
PABPC1-220ENST00000522658 GNAI1P63096 354 aa7.96□□□□□ -1.14
PABPC1-220ENST00000522658 CCDC30Q5VVM6 783 aa7.96□□□□□ -1.14
PABPC1-220ENST00000522658 COA1Q9GZY4 146 aa7.96□□□□□ -1.14
PABPC1-220ENST00000522658 TRIM17Q9Y577 477 aa7.96□□□□□ -1.14
PABPC1-220ENST00000522658 COL1A1P02452 1464 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 MANSC4A6NHS7 340 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 ELL2O00472 640 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 WDHD1O75717 1129 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 SASH1O94885 1247 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 DGKGP49619 791 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 CCT4P50991 539 aaKnown RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 TNP2Q05952 138 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 ARHGEF6Q15052 776 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 PRAMEF18Q5VWM3 479 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 MOB2Q70IA6 237 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 KLF15Q9UIH9 416 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 ANGEL1Q9UNK9 670 aaKnown RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 SCAF8Q9UPN6 1271 aaKnown RBP7.95□□□□□ -1.14
PABPC1-220ENST00000522658 USP3Q9Y6I4 520 aa7.95□□□□□ -1.14
PABPC1-220ENST00000522658 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
PABPC1-220ENST00000522658 WNT10BO00744 389 aa7.94□□□□□ -1.14
PABPC1-220ENST00000522658 CDK2AP1O14519 115 aa7.94□□□□□ -1.14
PABPC1-220ENST00000522658 ATXN7O15265 892 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms