RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 PGAP2Q9UHJ9 254 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 SCN4AP35499 1836 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 MYH13Q9UKX3 1938 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 WNT10BO00744 389 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 EGFRP00533 1210 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 CRKP46108 304 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 GSTO1P78417 241 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 APOBEC3HQ6NTF7 200 aaKnown RBP10.1□□□□□ -0.79
VPS13B-210ENST00000521932 DZIP1Q86YF9 867 aaKnown RBP10.1□□□□□ -0.79
VPS13B-210ENST00000521932 KBTBD3Q8NAB2 608 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 ZNF526Q8TF50 670 aaPredicted RBP10.1□□□□□ -0.79
VPS13B-210ENST00000521932 TEKT1Q969V4 418 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 EVI5LQ96CN4 794 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 RAI14Q9P0K7 980 aa10.1□□□□□ -0.79
VPS13B-210ENST00000521932 GAKO14976 1311 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 GPR75-ASB3A0A0A6YYF3 556 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 IDH1O75874 414 aaKnown RBP10.09□□□□□ -0.79
VPS13B-210ENST00000521932 LDHCP07864 332 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 ADD2P35612 726 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 CTDSPL2Q05D32 466 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 KIF4BQ2VIQ3 1234 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 CFAP100Q494V2 611 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 TTC22Q5TAA0 569 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 SLC9C2Q5TAH2 1124 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 NAA16Q6N069 864 aaPredicted RBP10.09□□□□□ -0.79
VPS13B-210ENST00000521932 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
VPS13B-210ENST00000521932 PRMT6Q96LA8 375 aaPredicted RBP10.09□□□□□ -0.79
VPS13B-210ENST00000521932 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■■■□ 22.4
VPS13B-210ENST00000521932 GMPR2Q9P2T1 348 aaKnown RBP10.09□□□□□ -0.79
VPS13B-210ENST00000521932 TCRBV5S4A2TA0A5A2 114 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
VPS13B-210ENST00000521932 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
VPS13B-210ENST00000521932 GSPT1P15170 499 aaKnown RBP10.08□□□□□ -0.8
VPS13B-210ENST00000521932 RBM5P52756 815 aaKnown RBP eCLIP10.08□□□□□ -0.8
VPS13B-210ENST00000521932 UBE3CQ15386 1083 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 NBPF9Q3BBW0 867 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 TBC1D10BQ4KMP7 808 aaPredicted RBP10.08□□□□□ -0.8
VPS13B-210ENST00000521932 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 CNTROBQ8N137 903 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 MAGEB6Q8N7X4 407 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 DAGLAQ9Y4D2 1042 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 PCDHAC2Q9Y5I4 1007 aa10.08□□□□□ -0.8
VPS13B-210ENST00000521932 MROH7-TTC4A0A0A0MT08 1334 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 MYO1BO43795 1136 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 PDE6AP16499 860 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 SDSP20132 328 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 LRRFIP1Q32MZ4 808 aaKnown RBP10.07□□□□□ -0.8
VPS13B-210ENST00000521932 ADGRA1Q86SQ6 560 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 ZNF775Q96BV0 537 aaPredicted RBP10.07□□□□□ -0.8
VPS13B-210ENST00000521932 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 ZNF532Q9HCE3 1301 aa10.07□□□□□ -0.8
VPS13B-210ENST00000521932 RFX7Q2KHR2 1363 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 RNF113AO15541 343 aaKnown RBP10.06□□□□□ -0.8
VPS13B-210ENST00000521932 TOMM70O94826 608 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 BAG3O95817 575 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 CYP7A1P22680 504 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 VARSP26640 1264 aaKnown RBP10.06□□□□□ -0.8
VPS13B-210ENST00000521932 BTDP43251 543 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 EAPPQ56P03 285 aaPredicted RBP10.06□□□□□ -0.8
VPS13B-210ENST00000521932 BMP2KLQ5H9B9 411 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 FKBP1CQ5VVH2 108 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 CDC42EP5Q6NZY7 148 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 LDHDQ86WU2 507 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 CERS3Q8IU89 383 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 LRRN4Q8WUT4 740 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 RILPL2Q969X0 211 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 FSD1Q9BTV5 496 aa10.06□□□□□ -0.8
VPS13B-210ENST00000521932 TDRD3Q9H7E2 651 aaKnown RBP10.06□□□□□ -0.8
VPS13B-210ENST00000521932 MYO5AQ9Y4I1 1855 aaKnown RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 CHGBP05060 677 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 RGS3P49796 1198 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 RHBDL3P58872 404 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 ANGEL2Q5VTE6 544 aaKnown RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 APPBP2Q92624 585 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 DCPSQ96C86 337 aaKnown RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 RIOK1Q9BRS2 568 aaKnown RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 IDI2Q9BXS1 227 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 USP40Q9NVE5 1235 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 AATFQ9NY61 560 aaKnown RBP eCLIP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 ZNF70Q9UC06 446 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 ADAMTSL1Q8N6G6 1762 aa10.05□□□□□ -0.8
VPS13B-210ENST00000521932 ASTN2O75129 1339 aaPredicted RBP10.05□□□□□ -0.8
VPS13B-210ENST00000521932 MYH2Q9UKX2 1941 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 MAGEB6P1A0A0J9YX57 407 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 HIP1O00291 1037 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 SLFNL1Q499Z3 407 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 ZMYM1Q5SVZ6 1142 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 CDC37L1Q7L3B6 337 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 FAM83AQ86UY5 434 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 MIGA1Q8NAN2 632 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 OSBP2Q969R2 916 aa10.04□□□□□ -0.8
VPS13B-210ENST00000521932 NOL10Q9BSC4 688 aaKnown RBP10.04□□□□□ -0.8
VPS13B-210ENST00000521932 ATP13A2Q9NQ11 1180 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms