RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 RIPOR1Q6ZS17 1223 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 CERS3Q8IU89 383 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 FAM178BQ8IXR5 827 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 GRIN3AQ8TCU5 1115 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 EMILIN2Q9BXX0 1053 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 G3BP2Q9UN86 482 aaKnown RBP9.51□□□□□ -0.89
SPIDR-215ENST00000521798 FAN1Q9Y2M0 1017 aa9.51□□□□□ -0.89
SPIDR-215ENST00000521798 ABCC11Q96J66 1382 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 MEIS3P2A8K0S8 358 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 J3QW42 95 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 ASMTLO95671 621 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 MLLT1Q03111 559 aaPredicted RBP9.5□□□□□ -0.89
SPIDR-215ENST00000521798 ZNF252P-AS1Q0IIN9 211 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 NEUROD1Q13562 356 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 RUFY4Q6ZNE9 571 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 TM9SF2Q99805 663 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 CBX8Q9HC52 389 aa9.5□□□□□ -0.89
SPIDR-215ENST00000521798 LAMC1P11047 1609 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
SPIDR-215ENST00000521798 ADGRL3Q9HAR2 1447 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 SMNDC1O75940 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPIDR-215ENST00000521798 GHRHP01286 108 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 CD33P20138 364 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
SPIDR-215ENST00000521798 TTC6Q86TZ1 520 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 ZSWIM2Q8NEG5 633 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 RBSNQ9H1K0 784 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 STK26Q9P289 416 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 SOX13Q9UN79 622 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 CD2APQ9Y5K6 639 aa9.49□□□□□ -0.89
SPIDR-215ENST00000521798 DCCP43146 1447 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
SPIDR-215ENST00000521798 UPK3BL1B0FP48 263 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 UPK3BL2E5RIL1 263 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 H7C1W4 665 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 GRIN3BO60391 1043 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 GUCY2CP25092 1073 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 PTPN11Q06124 597 aaPredicted RBP9.48□□□□□ -0.89
SPIDR-215ENST00000521798 PCSK7Q16549 785 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 LRRFIP1Q32MZ4 808 aaKnown RBP9.48□□□□□ -0.89
SPIDR-215ENST00000521798 TMEM67Q5HYA8 995 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 HFE2Q6ZVN8 426 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 VN1R5Q7Z5H4 357 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 ABHD17AQ96GS6 310 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 PLEKHH1Q9ULM0 1364 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 KNDC1Q76NI1 1749 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
SPIDR-215ENST00000521798 FAM182BQ5T319 152 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 CEP135Q66GS9 1140 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 WAPLQ7Z5K2 1190 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 PDZD3Q86UT5 571 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 FERMT3Q86UX7 667 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 TAB3Q8N5C8 712 aaPredicted RBP9.47□□□□□ -0.89
SPIDR-215ENST00000521798 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 NALCNQ8IZF0 1738 aa9.47□□□□□ -0.89
SPIDR-215ENST00000521798 AVPP01185 164 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 ATF3P18847 181 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 EIF2AK2P19525 551 aaKnown RBP9.46□□□□□ -0.9
SPIDR-215ENST00000521798 HSPA1LP34931 641 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 ODR4Q5SWX8 454 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 ADAMTSL4Q6UY14 1074 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 EEPD1Q7L9B9 569 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 TMEM40Q8WWA1 233 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 IER2Q9BTL4 223 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 ANTXR1Q9H6X2 564 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 ATXN7L1Q9ULK2 861 aaPredicted RBP9.46□□□□□ -0.9
SPIDR-215ENST00000521798 SLC12A7Q9Y666 1083 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 PRR36Q9H6K5 1346 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 MST1RQ04912 1400 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 DLC1Q96QB1 1528 aa9.46□□□□□ -0.9
SPIDR-215ENST00000521798 ESRRAP11474 423 aaPredicted RBP9.45□□□□□ -0.9
SPIDR-215ENST00000521798 PTPRAP18433 802 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 LONRF2Q1L5Z9 754 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.45□□□□□ -0.9
SPIDR-215ENST00000521798 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 PRPF38AQ8NAV1 312 aaKnown RBP9.45□□□□□ -0.9
SPIDR-215ENST00000521798 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 MFSD3Q96ES6 412 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 DNAJB12Q9NXW2 375 aaKnown RBP9.45□□□□□ -0.9
SPIDR-215ENST00000521798 ROBO1Q9Y6N7 1651 aa9.45□□□□□ -0.9
SPIDR-215ENST00000521798 NCAPHQ15003 741 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 DBN1Q16643 649 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 TM4SF20Q53R12 229 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 HGSNATQ68CP4 663 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 TRIM22Q8IYM9 498 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 DDX54Q8TDD1 881 aaKnown RBP9.44□□□□□ -0.9
SPIDR-215ENST00000521798 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 PRAM1Q96QH2 718 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 CEP89Q96ST8 783 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 KIAA1210Q9ULL0 1709 aa9.44□□□□□ -0.9
SPIDR-215ENST00000521798 CDC42BPGQ6DT37 1551 aa9.43□□□□□ -0.9
SPIDR-215ENST00000521798 TONSLQ96HA7 1378 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms