RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 USP17L12C9JPN9 530 aa23.25■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L21D6R901 530 aa23.25■■□□□ 1.31
R3HCC1-207ENST00000521588 STRBPQ96SI9 672 aaKnown RBP23.25■■□□□ 1.31
R3HCC1-207ENST00000521588 TXNRD2Q9NNW7 524 aa23.25■■□□□ 1.31
R3HCC1-207ENST00000521588 GJD2Q9UKL4 321 aa23.25■■□□□ 1.31
R3HCC1-207ENST00000521588 CYP2D7A0A087X1C5 515 aa23.24■■□□□ 1.31
R3HCC1-207ENST00000521588 SMIM22K7EJ46 135 aa23.24■■□□□ 1.31
R3HCC1-207ENST00000521588 PEX10O60683 326 aa23.24■■□□□ 1.31
R3HCC1-207ENST00000521588 PI4K2BQ8TCG2 481 aa23.24■■□□□ 1.31
R3HCC1-207ENST00000521588 OTUD7AQ8TE49 926 aaPredicted RBP23.24■■□□□ 1.31
R3HCC1-207ENST00000521588 FEZ1Q99689 392 aa23.24■■□□□ 1.31
R3HCC1-207ENST00000521588 A0A1W2PRG0 241 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L15C9J2P7 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L13C9JLJ4 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L11C9JVI0 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L18D6R9N7 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L22D6RA61 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L17D6RBQ6 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L19D6RCP7 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L20D6RJB6 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 RNF113AO15541 343 aaKnown RBP23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 CCL5P13501 91 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 ELNP15502 786 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 UBXN2AP68543 259 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 USP17L24Q0WX57 530 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 ZYXQ15942 572 aaKnown RBP23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 GPRC5AQ8NFJ5 357 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 GTF3C2Q8WUA4 911 aaPredicted RBP23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 OSBP2Q969R2 916 aa23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 BIN2Q9UBW5 565 aaPredicted RBP23.23■■□□□ 1.31
R3HCC1-207ENST00000521588 CDK8P49336 464 aa23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 Q3C1V9 767 aa23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 PRPF38BQ5VTL8 546 aaKnown RBP23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 CTR9Q6PD62 1173 aa23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 TMEM179Q6ZVK1 233 aa23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 SIAH1Q8IUQ4 282 aa23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 APPBP2Q92624 585 aa23.22■■□□□ 1.31
R3HCC1-207ENST00000521588 GSG1L2A8MUP6 293 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 MPHOSPH10O00566 681 aaKnown RBP23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 GJB1P08034 283 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 ZFYP08048 801 aaPredicted RBP23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 VCAM1P19320 739 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 HDAC1Q13547 482 aaPredicted RBP23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 C16orf86Q6ZW13 317 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 AMOTL1Q8IY63 956 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 CCDC17Q96LX7 622 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 SALL3Q9BXA9 1300 aa23.21■■□□□ 1.31
R3HCC1-207ENST00000521588 ERC2O15083 957 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 GLRX3O76003 335 aaKnown RBP23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 AKR1B1P15121 316 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 ERVK-9P63128 1117 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 ERVK-24P63145 666 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 SBK1Q52WX2 424 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 GIMAP6Q6P9H5 292 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 SHISA4Q96DD7 197 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 RNF208Q9H0X6 261 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 UNC93B1Q9H1C4 597 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 RABGAP1Q9Y3P9 1069 aa23.2■■□□□ 1.3
R3HCC1-207ENST00000521588 CNMDO75829 334 aa23.19■■□□□ 1.3
R3HCC1-207ENST00000521588 INHAP05111 366 aa23.19■■□□□ 1.3
R3HCC1-207ENST00000521588 GJA8P48165 433 aa23.19■■□□□ 1.3
R3HCC1-207ENST00000521588 LBX2Q6XYB7 198 aa23.19■■□□□ 1.3
R3HCC1-207ENST00000521588 NKX2-3Q8TAU0 364 aa23.19■■□□□ 1.3
R3HCC1-207ENST00000521588 GCC1Q96CN9 775 aa23.19■■□□□ 1.3
R3HCC1-207ENST00000521588 PLXNB2O15031 1838 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 MX1P20591 662 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 AAMPQ13685 434 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 PAGR1Q9BTK6 254 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 PORCNQ9H237 461 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 RPAP3Q9H6T3 665 aaPredicted RBP23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 ARPP21Q9UBL0 812 aaPredicted RBP23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 MYH8P13535 1937 aa23.18■■□□□ 1.3
R3HCC1-207ENST00000521588 GPAA1O43292 621 aa23.17■■□□□ 1.3
R3HCC1-207ENST00000521588 MAPK4P31152 587 aa23.17■■□□□ 1.3
R3HCC1-207ENST00000521588 TMX2Q9Y320 296 aa23.17■■□□□ 1.3
R3HCC1-207ENST00000521588 CEP290O15078 2479 aa23.16■■□□□ 1.3
R3HCC1-207ENST00000521588 M0R2C6 588 aa23.16■■□□□ 1.3
R3HCC1-207ENST00000521588 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
R3HCC1-207ENST00000521588 KIAA1755Q5JYT7 1200 aa23.16■■□□□ 1.3
R3HCC1-207ENST00000521588 USP6NLQ92738 828 aa23.16■■□□□ 1.3
R3HCC1-207ENST00000521588 SPDYE16A6NNV3 312 aaPredicted RBP23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 SGPL1O95470 568 aa23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 GNAT2P19087 354 aa23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 UBE2Q1Q7Z7E8 422 aa23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 CLEC10AQ8IUN9 316 aa23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 U2AF1L4Q8WU68 220 aaKnown RBP23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 PAK6Q9NQU5 681 aaPredicted RBP23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 STAP2Q9UGK3 403 aa23.15■■□□□ 1.3
R3HCC1-207ENST00000521588 XRCC5P13010 732 aaKnown RBP23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 ICA1Q05084 483 aa23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 COG2Q14746 738 aa23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 MORN1Q5T089 497 aa23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 GPR142Q7Z601 462 aa23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 SEC62Q99442 399 aaKnown RBP23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 NUDT12Q9BQG2 462 aa23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.29
R3HCC1-207ENST00000521588 ARHGEF10LQ9HCE6 1279 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms