RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 EHD4Q9H223 541 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 MYH7P12883 1935 aa12.32□□□□□ -0.44
TRIM35-204ENST00000521283 MAGEB6P1A0A0J9YX57 407 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 TLR2O60603 784 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 ZFYP08048 801 aaPredicted RBP12.31□□□□□ -0.44
TRIM35-204ENST00000521283 PDE6AP16499 860 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 SP3Q02447 781 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.441e-7■■□□□ 13.3
TRIM35-204ENST00000521283 CRHR2Q13324 411 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 KIF22Q14807 665 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 ADGRA1Q86SQ6 560 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 TICAM2Q86XR7 235 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 BOLA2Q9H3K6 86 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 ANTXR1Q9H6X2 564 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 AFG3L2Q9Y4W6 797 aa12.31□□□□□ -0.44
TRIM35-204ENST00000521283 A0A0G2JLL6 359 aaPredicted RBP12.3□□□□□ -0.44
TRIM35-204ENST00000521283 USP17L5A8MUK1 530 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 FBXO46Q6PJ61 603 aaPredicted RBP12.3□□□□□ -0.44
TRIM35-204ENST00000521283 PRRT2Q7Z6L0 340 aaPredicted RBP12.3□□□□□ -0.44
TRIM35-204ENST00000521283 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 AMOTL1Q8IY63 956 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 PROCA1Q8NCQ7 364 aaPredicted RBP12.3□□□□□ -0.44
TRIM35-204ENST00000521283 DDX12PQ92771 950 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 PARK7Q99497 189 aaKnown RBP12.3□□□□□ -0.44
TRIM35-204ENST00000521283 EPAS1Q99814 870 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
TRIM35-204ENST00000521283 BTBD19C9JJ37 291 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 GLRX3O76003 335 aaKnown RBP12.29□□□□□ -0.44
TRIM35-204ENST00000521283 ADD2P35612 726 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 PRMT2P55345 433 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 E2F4Q16254 413 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 PROX2Q3B8N5 592 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 FAM43AQ8N2R8 423 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 MIGA1Q8NAN2 632 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 ZNF280CQ8ND82 737 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 RIOK1Q9BRS2 568 aaKnown RBP12.29□□□□□ -0.44
TRIM35-204ENST00000521283 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
TRIM35-204ENST00000521283 PNMA3Q9UL41 463 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 ZNF532Q9HCE3 1301 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 PTPRFP10586 1907 aa12.29□□□□□ -0.44
TRIM35-204ENST00000521283 PHIPQ8WWQ0 1821 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 TCRBV5S4A2TA0A5A2 114 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 PDHXO00330 501 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 DYNLL1P63167 89 aaKnown RBP12.28□□□□□ -0.44
TRIM35-204ENST00000521283 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 KBTBD3Q8NAB2 608 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 CRBNQ96SW2 442 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 WDR18Q9BV38 432 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
TRIM35-204ENST00000521283 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
TRIM35-204ENST00000521283 HOXD10P28358 340 aa12.27□□□□□ -0.45
TRIM35-204ENST00000521283 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
TRIM35-204ENST00000521283 TATDN1Q6P1N9 297 aa12.27□□□□□ -0.45
TRIM35-204ENST00000521283 EFCC1Q9HA90 598 aa12.27□□□□□ -0.45
TRIM35-204ENST00000521283 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
TRIM35-204ENST00000521283 SWAP70Q9UH65 585 aa12.27□□□□□ -0.45
TRIM35-204ENST00000521283 CCDC85CA6NKD9 419 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 SMARCA5O60264 1052 aaPredicted RBP12.26□□□□□ -0.45
TRIM35-204ENST00000521283 GNAT2P19087 354 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 GIMAP6Q6P9H5 292 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 C17orf99Q6UX52 265 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 BCL11AQ9H165 835 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 R3HDMLQ9H3Y0 253 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 TMOD4Q9NZQ9 345 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 AGTPBP1Q9UPW5 1226 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 TRIM17Q9Y577 477 aa12.26□□□□□ -0.45
TRIM35-204ENST00000521283 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 NAV1Q8NEY1 1877 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 MX1P20591 662 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 OSBPP22059 807 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 GCLCP48506 637 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 USP14P54578 494 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 BACE1P56817 501 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 LACTBP83111 547 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 SPP2Q13103 211 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 MOGSQ13724 837 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 CERKLQ49MI3 558 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 ANKRD45Q5TZF3 282 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 GADL1Q6ZQY3 521 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 OTOP1Q7RTM1 612 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 GTF3C2Q8WUA4 911 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 SAP30BPQ9UHR5 308 aaKnown RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 ARIH1Q9Y4X5 557 aaPredicted RBP12.25□□□□□ -0.45
TRIM35-204ENST00000521283 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
TRIM35-204ENST00000521283 LOC285556D6RIA3 1793 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 RNF113AO15541 343 aaKnown RBP12.24□□□□□ -0.45
TRIM35-204ENST00000521283 MYH8P13535 1937 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 RGS19P49795 217 aa12.24□□□□□ -0.45
TRIM35-204ENST00000521283 GPAT2Q6NUI2 795 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms