RNA–Protein interactions for RNA: ENST00000521193.5

TOP1MT-213, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2 BASIC

Gene TOP1MT, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-213ENST00000521193 RASA3Q14644 834 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 FKBP1CQ5VVH2 108 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 TNPO1Q92973 898 aaKnown RBP15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 FZD1Q9UP38 647 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 ZDHHC9Q9Y397 364 aa15.23■□□□□ 0.03
TOP1MT-213ENST00000521193 COL2A1P02458 1487 aaPredicted RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 AKR1B1P15121 316 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 CCDC178Q5BJE1 867 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 DGKHQ86XP1 1220 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 STX8Q9UNK0 236 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 STX6O43752 255 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 VEGFAP15692 232 aaPredicted RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 RTN1Q16799 776 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 MAP1SQ66K74 1059 aaPredicted RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 FOXP4Q8IVH2 680 aaPredicted RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 DEFB129Q9H1M3 183 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 PGAP2Q9UHJ9 254 aa15.22■□□□□ 0.03
TOP1MT-213ENST00000521193 BRD1O95696 1058 aa15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 PDCP20941 246 aa15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 RCAN1P53805 252 aa15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 CPLX2Q6PUV4 134 aaKnown RBP15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 FAM83AQ86UY5 434 aa15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 FANCBQ8NB91 859 aa15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 TEPSINQ96N21 525 aa15.21■□□□□ 0.03
TOP1MT-213ENST00000521193 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.02
TOP1MT-213ENST00000521193 NID2Q14112 1375 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 MPHOSPH10O00566 681 aaKnown RBP15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 TROAPQ12815 778 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CEP95Q96GE4 821 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 PLIN4Q96Q06 1357 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CDKL5O76039 1030 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 DDAH1O94760 285 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CALM1P0DP23 149 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CALM2P0DP24 149 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CALM3P0DP25 149 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 TNNI2P48788 182 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 SHROOM1Q2M3G4 852 aaPredicted RBP15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 METTL16Q86W50 562 aaKnown RBP15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 ANKS1AQ92625 1134 aa15.2■□□□□ 0.02
TOP1MT-213ENST00000521193 CCDC196A0A1B0GTZ2 297 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 FDPSP14324 419 aaKnown RBP15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 NTRK3Q16288 839 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 CERKLQ49MI3 558 aaPredicted RBP15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 MIGA2Q7L4E1 593 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 PNMA1Q8ND90 353 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 PHKBQ93100 1093 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 CCDC17Q96LX7 622 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 ORC3Q9UBD5 711 aaPredicted RBP15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
TOP1MT-213ENST00000521193 TRAF5O00463 557 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 NFKBIBQ15653 356 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 TATDN1Q6P1N9 297 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 KRT26Q7Z3Y9 468 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 GPBP1L1Q9HC44 474 aaPredicted RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 MTMR6Q9Y217 621 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 ZSCAN22P10073 491 aaPredicted RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 YY1P25490 414 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 FOSBP53539 338 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 PPP2R5BQ15173 497 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 CCDC82Q8N4S0 544 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 MTMR4Q9NYA4 1195 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 MTMR7Q9Y216 660 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 SSC5DA1L4H1 1573 aa15.18■□□□□ 0.02
TOP1MT-213ENST00000521193 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 GDF11O95390 407 aa15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 IFNAR1P17181 557 aa15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 DEKP35659 375 aaKnown RBP15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 RRP1BQ14684 758 aaKnown RBP15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 CLEC10AQ8IUN9 316 aa15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
TOP1MT-213ENST00000521193 H3BQV1 296 aa15.16■□□□□ 0.02
TOP1MT-213ENST00000521193 KIF3CO14782 793 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms