RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 LOC285556D6RIA3 1793 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 BACE1P56817 501 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 CCDC84Q86UT8 332 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 PI4K2BQ8TCG2 481 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 SDR42E1Q8WUS8 393 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 STAP2Q9UGK3 403 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 SALL3Q9BXA9 1300 aa12.52□□□□□ -0.41
TRAPPC9-209ENST00000521167 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 PRKAB2O43741 272 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 GDF11O95390 407 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 CENPBP07199 599 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 BCRP11274 1271 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 JAG1P78504 1218 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 GABPAQ06546 454 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 SLC4A8Q2Y0W8 1093 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 TSHZ3Q63HK5 1081 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 AMOTL1Q8IY63 956 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 APPBP2Q92624 585 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 PUS7LQ9H0K6 701 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 SWAP70Q9UH65 585 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 SLC4A4Q9Y6R1 1079 aa12.51□□□□□ -0.41
TRAPPC9-209ENST00000521167 GH2P01242 217 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 CYP2C8P10632 490 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 OSBPP22059 807 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 SHMT1P34896 483 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 RGS19P49795 217 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 HMGCS2P54868 508 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 PRMT2P55345 433 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
TRAPPC9-209ENST00000521167 USP17L12C9JPN9 530 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 USP17L21D6R901 530 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 CHGBP05060 677 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 GNAT2P19087 354 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 HOXD10P28358 340 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 HOXA7P31268 230 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 PDE1AP54750 535 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 TREML2Q5T2D2 321 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 OSBP2Q969R2 916 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
TRAPPC9-209ENST00000521167 SNPHO15079 494 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 CYP2D6P10635 497 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 PSMC4P43686 418 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 USP14P54578 494 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 CAP1Q01518 475 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 MTMR2Q13614 643 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 USP17L2Q6R6M4 530 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 ZSWIM8A7E2V4 1837 aa12.48□□□□□ -0.41
TRAPPC9-209ENST00000521167 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 PATL2C9JE40 543 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 STK25O00506 426 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 GPAA1O43292 621 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 IGHDP01880 384 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 CDK8P49336 464 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 NUCB1Q02818 461 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 SHROOM1Q2M3G4 852 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 ZMYM1Q5SVZ6 1142 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 C12orf42Q96LP6 360 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 ARHGAP39Q9C0H5 1083 aa12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 ASCC2Q9H1I8 757 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 ARPP21Q9UBL0 812 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-209ENST00000521167 ST18O60284 1047 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 FCGRTP55899 365 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
TRAPPC9-209ENST00000521167 NBPF11Q86T75 865 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms