RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ACER1Q8TDN7 264 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 SOCS4Q8WXH5 440 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 NUDT12Q9BQG2 462 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 PAGR1Q9BTK6 254 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 MCM9Q9NXL9 1143 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 RPTORQ8N122 1335 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L15C9J2P7 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L13C9JLJ4 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L11C9JVI0 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L18D6R9N7 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L22D6RA61 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L17D6RBQ6 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L19D6RCP7 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L20D6RJB6 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 XRCC5P13010 732 aaKnown RBP23.78■■□□□ 1.4
PABPC1-215ENST00000520804 ATP5JP18859 108 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 FXR1P51114 621 aaKnown RBP eCLIP23.78■■□□□ 1.4
PABPC1-215ENST00000520804 USP17L24Q0WX57 530 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 LCORLQ8N3X6 602 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 SDR42E1Q8WUS8 393 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 TRIB2Q92519 343 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 PORCNQ9H237 461 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 BOLA2Q9H3K6 86 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 HMX1Q9NP08 348 aaPredicted RBP23.78■■□□□ 1.4
PABPC1-215ENST00000520804 PAG1Q9NWQ8 432 aa23.78■■□□□ 1.4
PABPC1-215ENST00000520804 GUCY1A2P33402 732 aa23.77■■□□□ 1.4
PABPC1-215ENST00000520804 EVX2Q03828 476 aa23.77■■□□□ 1.4
PABPC1-215ENST00000520804 CATSPERGQ6ZRH7 1159 aa23.77■■□□□ 1.4
PABPC1-215ENST00000520804 CCAR1Q8IX12 1150 aaKnown RBP23.77■■□□□ 1.4
PABPC1-215ENST00000520804 DCP1AQ9NPI6 582 aaPredicted RBP23.77■■□□□ 1.4
PABPC1-215ENST00000520804 NR2E3Q9Y5X4 410 aa23.77■■□□□ 1.4
PABPC1-215ENST00000520804 VCAM1P19320 739 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 ADD2P35612 726 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 PDE3AQ14432 1141 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 CHRDL2Q6WN34 429 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 GPR142Q7Z601 462 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 USP6NLQ92738 828 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 RABGAP1Q9Y3P9 1069 aa23.76■■□□□ 1.39
PABPC1-215ENST00000520804 SEPT2Q15019 361 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 MAP3K21Q5TCX8 1036 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 C20orf194Q5TEA3 1177 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 PLEKHH3Q7Z736 793 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 ANKLE1Q8NAG6 615 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 PAWRQ96IZ0 340 aaKnown RBP23.75■■□□□ 1.39
PABPC1-215ENST00000520804 HAUS7Q99871 368 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 ARMT1Q9H993 441 aa23.75■■□□□ 1.39
PABPC1-215ENST00000520804 CEP290O15078 2479 aa23.74■■□□□ 1.39
PABPC1-215ENST00000520804 CNMDO75829 334 aa23.74■■□□□ 1.39
PABPC1-215ENST00000520804 SLFNL1Q499Z3 407 aa23.74■■□□□ 1.39
PABPC1-215ENST00000520804 MORN1Q5T089 497 aa23.74■■□□□ 1.39
PABPC1-215ENST00000520804 TRMT44Q8IYL2 757 aaKnown RBP23.74■■□□□ 1.39
PABPC1-215ENST00000520804 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.74■■□□□ 1.39
PABPC1-215ENST00000520804 CYP2D6P10635 497 aa23.73■■□□□ 1.39
PABPC1-215ENST00000520804 RGS2P41220 211 aa23.73■■□□□ 1.39
PABPC1-215ENST00000520804 LBX2Q6XYB7 198 aa23.73■■□□□ 1.39
PABPC1-215ENST00000520804 NECAB2Q7Z6G3 386 aa23.73■■□□□ 1.39
PABPC1-215ENST00000520804 DIS3LQ8TF46 1054 aaKnown RBP23.73■■□□□ 1.39
PABPC1-215ENST00000520804 LRRCC1Q9C099 1032 aa23.73■■□□□ 1.39
PABPC1-215ENST00000520804 MPHOSPH10O00566 681 aaKnown RBP23.72■■□□□ 1.39
PABPC1-215ENST00000520804 EVI5O60447 810 aa23.72■■□□□ 1.39
PABPC1-215ENST00000520804 MBD4O95243 580 aa23.72■■□□□ 1.39
PABPC1-215ENST00000520804 PRKAR2AP13861 404 aaKnown RBP23.72■■□□□ 1.39
PABPC1-215ENST00000520804 ZKSCAN1P17029 563 aaPredicted RBP23.72■■□□□ 1.39
PABPC1-215ENST00000520804 CCNA1P78396 465 aa23.72■■□□□ 1.39
PABPC1-215ENST00000520804 RPAP3Q9H6T3 665 aaPredicted RBP23.72■■□□□ 1.39
PABPC1-215ENST00000520804 ATP8A2Q9NTI2 1148 aa23.72■■□□□ 1.39
PABPC1-215ENST00000520804 RBM27Q9P2N5 1060 aaKnown RBP23.72■■□□□ 1.39
PABPC1-215ENST00000520804 SWAP70Q9UH65 585 aa23.72■■□□□ 1.39
PABPC1-215ENST00000520804 A0A1W2PRG0 241 aa23.71■■□□□ 1.39
PABPC1-215ENST00000520804 PRKAB2O43741 272 aa23.71■■□□□ 1.39
PABPC1-215ENST00000520804 SLC44A5Q8NCS7 719 aa23.71■■□□□ 1.39
PABPC1-215ENST00000520804 CWC22Q9HCG8 908 aaKnown RBP23.71■■□□□ 1.39
PABPC1-215ENST00000520804 OGDHLQ9ULD0 1010 aa23.71■■□□□ 1.39
PABPC1-215ENST00000520804 GLRX3O76003 335 aaKnown RBP23.7■■□□□ 1.38
PABPC1-215ENST00000520804 CHGBP05060 677 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 MAP2K5Q13163 448 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 UBE3CQ15386 1083 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 CCL14Q16627 93 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 TMEM179Q6ZVK1 233 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 DYNLL2Q96FJ2 89 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 APBA2Q99767 749 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 PRO3102Q9H379 93 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 BTBD7Q9P203 1132 aa23.7■■□□□ 1.38
PABPC1-215ENST00000520804 MYH7P12883 1935 aa23.69■■□□□ 1.38
PABPC1-215ENST00000520804 SPDYE16A6NNV3 312 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-215ENST00000520804 SMARCA5O60264 1052 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-215ENST00000520804 MNX1P50219 401 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-215ENST00000520804 CACNB2Q08289 660 aaPredicted RBP23.69■■□□□ 1.38
PABPC1-215ENST00000520804 ALPK3Q96L96 1907 aa23.69■■□□□ 1.38
PABPC1-215ENST00000520804 NBPF3Q9H094 633 aa23.68■■□□□ 1.38
PABPC1-215ENST00000520804 MYH8P13535 1937 aa23.68■■□□□ 1.38
PABPC1-215ENST00000520804 BAZ2AQ9UIF9 1905 aaKnown RBP23.68■■□□□ 1.38
PABPC1-215ENST00000520804 SLC15A5A6NIM6 579 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 AKR1B1P15121 316 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 PTPREP23469 700 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 COG2Q14746 738 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 C12orf60Q5U649 245 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 WDR78Q5VTH9 848 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 ZSCAN25Q6NSZ9 544 aa23.67■■□□□ 1.38
PABPC1-215ENST00000520804 AMOTL1Q8IY63 956 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms