RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 IRF6O14896 467 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 INHBEP58166 350 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 RAB3GAP1Q15042 981 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 FAM47AQ5JRC9 791 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 CYP4F22Q6NT55 531 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 CNKSR2Q8WXI2 1034 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 OTUD5Q96G74 571 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 TTC14Q96N46 770 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 BACH2Q9BYV9 841 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 TOMM22Q9NS69 142 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 MTMR4Q9NYA4 1195 aa20.56■□□□□ 0.88
TRAM1-203ENST00000520700 GREB1LQ9C091 1923 aaPredicted RBP20.55■□□□□ 0.88
TRAM1-203ENST00000520700 B4E1Z4 1266 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 KDM4AO75164 1064 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 MAP2K2P36507 400 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 GTF2A2P52657 109 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 ANAPC15P60006 121 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 HTRA3P83110 453 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 SH3D19Q5HYK7 790 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 RRP12Q5JTH9 1297 aaKnown RBP20.55■□□□□ 0.88
TRAM1-203ENST00000520700 MB21D2Q8IYB1 491 aaPredicted RBP20.55■□□□□ 0.88
TRAM1-203ENST00000520700 NKX2-3Q8TAU0 364 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 ANKS1AQ92625 1134 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 MS4A4AQ96JQ5 239 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 SNX14Q9Y5W7 946 aa20.55■□□□□ 0.88
TRAM1-203ENST00000520700 WDR33Q9C0J8 1336 aaKnown RBP20.54■□□□□ 0.88
TRAM1-203ENST00000520700 MANSC4A6NHS7 340 aaPredicted RBP20.54■□□□□ 0.88
TRAM1-203ENST00000520700 USP17L10C9JJH3 530 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 HMGB1P09429 215 aaKnown RBP20.54■□□□□ 0.88
TRAM1-203ENST00000520700 VEGFBP49765 207 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 BACE1P56817 501 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 ICA1Q05084 483 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 SPP2Q13103 211 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 SNAPC2Q13487 334 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
TRAM1-203ENST00000520700 IQCA1Q86XH1 822 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 DGKHQ86XP1 1220 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 DNAJC5GQ8N7S2 189 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 KIAA1683Q9H0B3 1180 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.54■□□□□ 0.88
TRAM1-203ENST00000520700 TMX2Q9Y320 296 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 MYH8P13535 1937 aa20.54■□□□□ 0.88
TRAM1-203ENST00000520700 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
TRAM1-203ENST00000520700 TTLL1O95922 423 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
TRAM1-203ENST00000520700 CEP95Q96GE4 821 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 NEK1Q96PY6 1258 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 SH2D4AQ9H788 454 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 ATAD5Q96QE3 1844 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 WDR19Q8NEZ3 1342 aa20.53■□□□□ 0.88
TRAM1-203ENST00000520700 A0A1W2PRG0 241 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 CETPP11597 493 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 EEF2P13639 858 aaKnown RBP20.52■□□□□ 0.88
TRAM1-203ENST00000520700 TM4SF4P48230 202 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 USP14P54578 494 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 CCDC84Q86UT8 332 aaPredicted RBP20.52■□□□□ 0.88
TRAM1-203ENST00000520700 ACER1Q8TDN7 264 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 C12orf42Q96LP6 360 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 PHIPQ8WWQ0 1821 aa20.52■□□□□ 0.88
TRAM1-203ENST00000520700 PSMA5P28066 241 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 MCM5P33992 734 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 EXOSC10Q01780 885 aaKnown RBP20.51■□□□□ 0.87
TRAM1-203ENST00000520700 MOGSQ13724 837 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 RCSD1Q6JBY9 416 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 USP17L2Q6R6M4 530 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 PAXIP1Q6ZW49 1069 aaPredicted RBP20.51■□□□□ 0.87
TRAM1-203ENST00000520700 CYB5R4Q7L1T6 521 aa20.51■□□□□ 0.87
TRAM1-203ENST00000520700 FASTKD5Q7L8L6 764 aaKnown RBP20.51■□□□□ 0.87
TRAM1-203ENST00000520700 PROCA1Q8NCQ7 364 aaPredicted RBP20.51■□□□□ 0.87
TRAM1-203ENST00000520700 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
TRAM1-203ENST00000520700 TRIM75PA6NK02 468 aa20.5■□□□□ 0.87
TRAM1-203ENST00000520700 KIF23Q02241 960 aaPredicted RBP20.5■□□□□ 0.87
TRAM1-203ENST00000520700 SEC23AQ15436 765 aa20.5■□□□□ 0.87
TRAM1-203ENST00000520700 DHX32Q7L7V1 743 aaKnown RBP20.5■□□□□ 0.87
TRAM1-203ENST00000520700 CLIP2Q9UDT6 1046 aa20.5■□□□□ 0.87
TRAM1-203ENST00000520700 NMT2O60551 498 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 RBM25P49756 843 aaKnown RBP20.49■□□□□ 0.87
TRAM1-203ENST00000520700 ANTXR2P58335 489 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 SREBF2Q12772 1141 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 FBXL16Q8N461 479 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 IGDCC4Q8TDY8 1250 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 LPAR1Q92633 364 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 TMEM87BQ96K49 555 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 UBAC1Q9BSL1 405 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 ZCCHC17Q9NP64 241 aaKnown RBP20.49■□□□□ 0.87
TRAM1-203ENST00000520700 EMILIN3Q9NT22 766 aa20.49■□□□□ 0.87
TRAM1-203ENST00000520700 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.49■□□□□ 0.87
TRAM1-203ENST00000520700 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
TRAM1-203ENST00000520700 MTMR2Q13614 643 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 SART3Q15020 963 aaKnown RBP20.48■□□□□ 0.87
TRAM1-203ENST00000520700 CLEC10AQ8IUN9 316 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 TMTC2Q8N394 836 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 ENAHQ8N8S7 591 aaPredicted RBP20.48■□□□□ 0.87
TRAM1-203ENST00000520700 GMCL1P1Q8NEA9 526 aa20.48■□□□□ 0.87
TRAM1-203ENST00000520700 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms