RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CTCFP49711 727 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 DYNLL1P63167 89 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 TRAF1Q13077 416 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 ALX1Q15699 326 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 GRIK5Q16478 980 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 SPRYD7Q5W111 196 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 CST9Q5W186 159 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 TSHZ3Q63HK5 1081 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 CWC27Q6UX04 472 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 MFSD6Q6ZSS7 791 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 MIGA2Q7L4E1 593 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 RASAL3Q86YV0 1011 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 LCORLQ8N3X6 602 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 PROCA1Q8NCQ7 364 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 ZNF280CQ8ND82 737 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 SMCR8Q8TEV9 937 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 LPAR1Q92633 364 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 OPTNQ96CV9 577 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 WNK4Q96J92 1243 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 PKNOX2Q96KN3 472 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 TEPSINQ96N21 525 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 KANSL2Q9H9L4 492 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 ELP3Q9H9T3 547 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 ZFYVE28Q9HCC9 887 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 SAP30BPQ9UHR5 308 aaKnown RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 ZNF112Q9UJU3 913 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 PALD1Q9ULE6 856 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 SLC45A1Q9Y2W3 748 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 MYH7P12883 1935 aa6.65□□□□□ -1.34
CTNNA1-220ENST00000520260 ASTN2O75129 1339 aaPredicted RBP6.65□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L12C9JPN9 530 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L21D6R901 530 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 GNRH1P01148 92 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 HMGB1P09429 215 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 HOXD10P28358 340 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 COPB2P35606 906 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 VEGFBP49765 207 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 CCNA1P78396 465 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 IRX3P78415 501 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 MAP3K10Q02779 954 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 MKRN3Q13064 507 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 RAB3GAP1Q15042 981 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 C12orf60Q5U649 245 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 CYP4F22Q6NT55 531 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 TATDN1Q6P1N9 297 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 USP17L2Q6R6M4 530 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 C16orf86Q6ZW13 317 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 METTL16Q86W50 562 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 IFNL3Q8IZI9 196 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 JMYQ8N9B5 988 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 SDR42E1Q8WUS8 393 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 CHMP4CQ96CF2 233 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 EDC3Q96F86 508 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 UBAC1Q9BSL1 405 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 PUS7LQ9H0K6 701 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 ZBTB21Q9ULJ3 1066 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 ZHX2Q9Y6X8 837 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 ROBO3Q96MS0 1386 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 NAV1Q8NEY1 1877 aa6.64□□□□□ -1.35
CTNNA1-220ENST00000520260 CCL15-CCL14A0A0B4J2E2 113 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 GOLGA6L3A6NEY3 463 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 DDTLA6NHG4 134 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 FDX1P10109 184 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 PTPRAP18433 802 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 GCLCP48506 637 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 LSM11P83369 360 aaKnown RBP eCLIP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 FGD1P98174 961 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 KIF23Q02241 960 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 ICA1Q05084 483 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 PPARAQ07869 468 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 NMIQ13287 307 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 CCL15Q16663 113 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 NOM1Q5C9Z4 860 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 PRAMEF18Q5VWM3 479 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 ANKRD23Q86SG2 305 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 ADGRA1Q86SQ6 560 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 OTUD7AQ8TE49 926 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 OSBP2Q969R2 916 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 FAM212AQ96EL1 285 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 ERO1AQ96HE7 468 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 TBC1D32Q96NH3 1257 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 WDR18Q9BV38 432 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 ANO2Q9NQ90 1003 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 DDX4Q9NQI0 724 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 ANAPC4Q9UJX5 808 aa6.63□□□□□ -1.35
CTNNA1-220ENST00000520260 TRIM75PA6NK02 468 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 GSG1L2A8MUP6 293 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 ORC4O43929 436 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 RANBP6O60518 1105 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 TTLL1O95922 423 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 GH2P01242 217 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 HSP90AA1P07900 732 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 HSPD1P10809 573 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 XRCC6P12956 609 aaKnown RBP eCLIP6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 CHMLP26374 656 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 PSMA5P28066 241 aa6.62□□□□□ -1.35
CTNNA1-220ENST00000520260 MCM4P33991 863 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms