RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MCM6Q14566 821 aa6□□□□□ -1.45
SDC2-204ENST00000519914 TNNI3KQ59H18 835 aa6□□□□□ -1.45
SDC2-204ENST00000519914 EPHA10Q5JZY3 1008 aa6□□□□□ -1.45
SDC2-204ENST00000519914 SH3PXD2AQ5TCZ1 1133 aa6□□□□□ -1.45
SDC2-204ENST00000519914 COPS6Q7L5N1 327 aa6□□□□□ -1.45
SDC2-204ENST00000519914 SLC9A9Q8IVB4 645 aa6□□□□□ -1.45
SDC2-204ENST00000519914 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ANP32BQ92688 251 aaKnown RBP6□□□□□ -1.45
SDC2-204ENST00000519914 TRIM44Q96DX7 344 aaPredicted RBP6□□□□□ -1.45
SDC2-204ENST00000519914 AVENQ9NQS1 362 aaPredicted RBP6□□□□□ -1.45
SDC2-204ENST00000519914 PDRG1Q9NUG6 133 aa6□□□□□ -1.45
SDC2-204ENST00000519914 NOL7Q9UMY1 257 aaKnown RBP6□□□□□ -1.45
SDC2-204ENST00000519914 MTMR6Q9Y217 621 aa6□□□□□ -1.45
SDC2-204ENST00000519914 RBM8AQ9Y5S9 174 aaKnown RBP6□□□□□ -1.45
SDC2-204ENST00000519914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6□□□□□ -1.45
SDC2-204ENST00000519914 FPGT-TNNI3KV9GXZ4 949 aa6□□□□□ -1.45
SDC2-204ENST00000519914 MYH7P12883 1935 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ELP1O95163 1332 aa6□□□□□ -1.45
SDC2-204ENST00000519914 WDR17Q8IZU2 1322 aa6□□□□□ -1.45
SDC2-204ENST00000519914 SH3TC1Q8TE82 1336 aa6□□□□□ -1.45
SDC2-204ENST00000519914 PCDH11XQ9BZA7 1347 aa6□□□□□ -1.45
SDC2-204ENST00000519914 PCDH11YQ9BZA8 1340 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ANKRD36CQ5JPF3 1778 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ABCC12Q96J65 1359 aa6□□□□□ -1.45
SDC2-204ENST00000519914 ELOA3CA0A087WX78 387 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 ELOA3DA6NLF2 546 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 FAM229AH3BQW9 127 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ZNF500O60304 480 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 TAF5LO75529 589 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 CIAO1O76071 339 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 MAP4K4O95819 1239 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 CASTP20810 708 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 RPS6KB1P23443 525 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 TRIM28Q13263 835 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 SLC39A6Q13433 755 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ADCK5Q3MIX3 580 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ELOA3BQ3SY89 546 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 CCDC183Q5T5S1 534 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 PRPF40BQ6NWY9 871 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 USP48Q86UV5 1035 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 TTC5Q8N0Z6 440 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 FBXL16Q8N461 479 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 RGS22Q8NE09 1264 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ELOA3Q8NG57 546 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 MAP7D2Q96T17 732 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 MYD88Q99836 296 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 HAUS7Q99871 368 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 FUCA2Q9BTY2 467 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 CARD10Q9BWT7 1032 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 PLA2G12BQ9BX93 195 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 NLRP2Q9NX02 1062 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 DBNLQ9UJU6 430 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 SMC3Q9UQE7 1217 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 USP16Q9Y5T5 823 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 CICQ96RK0 1608 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 ZNF609O15014 1411 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 MYH3P11055 1940 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ITGB4P16144 1822 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 WNK3Q9BYP7 1800 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 A0A0D9SFI3 127 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ZBTB7CA1YPR0 619 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 EFSO43281 561 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 LARGE1O95461 756 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 PDCP20941 246 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 GJB2P29033 226 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 CABP4P57796 275 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 RBM10P98175 930 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 FOXO4P98177 505 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 TEAD4Q15561 434 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ME3Q16798 604 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 SAMD5Q5TGI4 173 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 C8orf86Q6ZUL3 223 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 RAB44Q7Z6P3 723 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 CCDC191Q8NCU4 936 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 POM121Q96HA1 1249 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 FAM227BQ96M60 508 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 JAKMIP1Q96N16 626 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 SLC30A3Q99726 388 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 AGXT2Q9BYV1 514 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 CCDC8Q9H0W5 538 aaPredicted RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 TSPY26PQ9H489 355 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 ALG2Q9H553 416 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 TLR7Q9NYK1 1049 aaKnown RBP5.99□□□□□ -1.45
SDC2-204ENST00000519914 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
SDC2-204ENST00000519914 LRP5O75197 1615 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 AKAP11Q9UKA4 1901 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 SYCE3A1L190 88 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 SERTM1A2A2V5 107 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 M0R082 166 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 GADD45BO75293 160 aaPredicted RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 ITGB7P26010 798 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 IL15P40933 162 aaPredicted RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 AIMP1Q12904 312 aaKnown RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 TOB2Q14106 344 aaPredicted RBP5.98□□□□□ -1.45
SDC2-204ENST00000519914 BLOC1S2Q6QNY1 142 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 BRINP3Q76B58 766 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 ATG9AQ7Z3C6 839 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 KBTBD3Q8NAB2 608 aa5.98□□□□□ -1.45
SDC2-204ENST00000519914 ZNF417Q8TAU3 575 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms