RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SAP30BPQ9UHR5 308 aaKnown RBP9.7□□□□□ -0.86
HMGB4-203ENST00000519684 ATP6V0A2Q9Y487 856 aa9.7□□□□□ -0.86
HMGB4-203ENST00000519684 PARP3Q9Y6F1 533 aa9.7□□□□□ -0.86
HMGB4-203ENST00000519684 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 GPR75-ASB3A0A0A6YYF3 556 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 AP5Z1O43299 807 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 FUT2Q10981 343 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 NR5A1Q13285 461 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 PKN1Q16512 942 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 DRC7Q8IY82 874 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 FBXW7Q969H0 707 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 AKT1S1Q96B36 256 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 DYNLL2Q96FJ2 89 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 PHF20Q9BVI0 1012 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 COA1Q9GZY4 146 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 FAM13BQ9NYF5 915 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 FAM205AQ6ZU69 1335 aa9.69□□□□□ -0.86
HMGB4-203ENST00000519684 G3V3G9 751 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 SHC4Q6S5L8 630 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 COL23A1Q86Y22 540 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 SPC24Q8NBT2 197 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 CABP5Q9NP86 173 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 HOOK1Q9UJC3 728 aaKnown RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 HPSEQ9Y251 543 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 DDX60LQ5H9U9 1706 aaKnown RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 FAM237AA0A1B0GTK4 181 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 hCG_1642624A0A1W2PR95 340 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 TRIM75PA6NK02 468 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 GNAQP50148 359 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 TOB1P50616 345 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 ZNF75DP51815 510 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 TPM4P67936 248 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 IQCB1Q15051 598 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 MPNDQ8N594 471 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 SRBD1Q8N5C6 995 aaKnown RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 PNMA1Q8ND90 353 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 FAM163AQ96GL9 167 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 NAP1L5Q96NT1 182 aaPredicted RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 CLIC6Q96NY7 704 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
HMGB4-203ENST00000519684 TCP11L1Q9NUJ3 509 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 MYH1P12882 1939 aa9.68□□□□□ -0.86
HMGB4-203ENST00000519684 BMP15O95972 392 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 SRGNP10124 158 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 SCG2P13521 617 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 NLRP12P59046 1061 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 NLRP5P59047 1200 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 GTF2IP78347 998 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 RCSD1Q6JBY9 416 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 DPP8Q6V1X1 898 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-203ENST00000519684 ANKS1AQ92625 1134 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 ERCC4Q92889 916 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-203ENST00000519684 KCNH3Q9ULD8 1083 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 SUGT1Q9Y2Z0 365 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 GAKO14976 1311 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 COL11A2P13942 1736 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-203ENST00000519684 FOCADQ5VW36 1801 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 MMP10P09238 476 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 SARM1Q6SZW1 724 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 PLA2G4DQ86XP0 818 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 AOPEPQ8N6M6 819 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 CNNM3Q8NE01 707 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 BPIFA3Q9BQP9 254 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 FBXO2Q9UK22 296 aaPredicted RBP9.67□□□□□ -0.86
HMGB4-203ENST00000519684 PCDHB6Q9Y5E3 794 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 FLT1P17948 1338 aa9.67□□□□□ -0.86
HMGB4-203ENST00000519684 QSER1Q2KHR3 1735 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 PTPREP23469 700 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 CALML3P27482 149 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 CDC25BP30305 580 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 PLCD1P51178 756 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 GRM4Q14833 912 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 PFKFB3Q16875 520 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 C16orf86Q6ZW13 317 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 DHX40Q8IX18 779 aaKnown RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 ZNF579Q8NAF0 562 aaKnown RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 MASTLQ96GX5 879 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 ZNF830Q96NB3 372 aaPredicted RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 EYA3Q99504 573 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 IL17RBQ9NRM6 502 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 SRPRBQ9Y5M8 271 aaKnown RBP9.66□□□□□ -0.86
HMGB4-203ENST00000519684 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 USP17L4A6NCW7 530 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 SMTNL1A8MU46 457 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 BIN1O00499 593 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 OFD1O75665 1012 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 RASA1P20936 1047 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 CDK8P49336 464 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 KRBA2Q6ZNG9 492 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 USP17L1Q7RTZ2 530 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 SLC44A5Q8NCS7 719 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
HMGB4-203ENST00000519684 CCDC34Q96HJ3 373 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms