RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 PARP2Q9UGN5 583 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 DENND4BO75064 1496 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-207ENST00000519632 SOWAHDA6NJG2 315 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 CREB3O43889 395 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 CLUL1Q15846 466 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-207ENST00000519632 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 EPC1Q9H2F5 836 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 FAF1Q9UNN5 650 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-207ENST00000519632 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.24
SHPRH-207ENST00000519632 CNNM4Q6P4Q7 775 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
SHPRH-207ENST00000519632 CCDC169A6NNP5 214 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 MORC3Q14149 939 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 EIF4A2Q14240 407 aaKnown RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 CAVIN4Q5BKX8 364 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 NCAPH2Q6IBW4 605 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 PEX26Q7Z412 305 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 TRAF5O00463 557 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 TADA3O75528 432 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 FAM133BQ5BKY9 247 aaKnown RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 KLC4Q9NSK0 619 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 RCOR1Q9UKL0 485 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 SLC4A4Q9Y6R1 1079 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 FLOT1O75955 427 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 C2orf54Q08AI8 447 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 CAPRIN2Q6IMN6 1127 aaKnown RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 PARP9Q8IXQ6 854 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 AMOTL2Q9Y2J4 779 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 CYP2E1P05181 493 aaPredicted RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 LMBR1LQ6UX01 489 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 UBL4BQ8N7F7 174 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 ZNF274Q96GC6 653 aaPredicted RBP13.54□□□□□ -0.24
SHPRH-207ENST00000519632 HDAC9Q9UKV0 1011 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 CLIC4Q9Y696 253 aa13.54□□□□□ -0.24
SHPRH-207ENST00000519632 GGCXP38435 758 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 HEATR3Q7Z4Q2 680 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 GPIHBP1Q8IV16 184 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 KCNK3O14649 394 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 SFMBT2Q5VUG0 894 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 FBXW10Q5XX13 1052 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 PCDHA5Q9Y5H7 936 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 HMGB1P1B2RPK0 211 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 KRIT1O00522 736 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 GJC1P36383 396 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 DNM2P50570 870 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 PANX2Q96RD6 677 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 EPB41L5Q9HCM4 733 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-207ENST00000519632 STAP2Q9UGK3 403 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 PPP1R9AQ9ULJ8 1098 aa13.53□□□□□ -0.24
SHPRH-207ENST00000519632 PPFIA2O75334 1257 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.24
SHPRH-207ENST00000519632 GNAQP50148 359 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 FBXO31Q5XUX0 539 aaPredicted RBP13.52□□□□□ -0.24
SHPRH-207ENST00000519632 SV2BQ7L1I2 683 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 CNOT10Q9H9A5 744 aaKnown RBP13.52□□□□□ -0.24
SHPRH-207ENST00000519632 ASIC3Q9UHC3 531 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 EEF2P13639 858 aaKnown RBP13.52□□□□□ -0.24
SHPRH-207ENST00000519632 RANBP1P43487 201 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 EMBQ6PCB8 327 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 TBC1D1Q86TI0 1168 aaPredicted RBP13.52□□□□□ -0.24
SHPRH-207ENST00000519632 ABTB1Q969K4 478 aaPredicted RBP13.52□□□□□ -0.24
SHPRH-207ENST00000519632 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.24
SHPRH-207ENST00000519632 CORO7P57737 925 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 IRX4P78413 519 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 ERMNQ8TAM6 284 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 KRT12Q99456 494 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 CHL1O00533 1208 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 BUB1O43683 1085 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 SPOPO43791 374 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 SKIP12755 728 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 STAMQ92783 540 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 C19orf44Q9H6X5 657 aa13.52□□□□□ -0.25
SHPRH-207ENST00000519632 BAG2O95816 211 aa13.51□□□□□ -0.25
SHPRH-207ENST00000519632 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms