RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 ZNF827Q17R98 1081 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 PHF20Q9BVI0 1012 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 CARD6Q9BX69 1037 aa12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 SAMSN1Q9NSI8 373 aaKnown RBP12.91□□□□□ -0.34
NUDCD1-203ENST00000519607 SEMA3EO15041 775 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 IGSF3O75054 1194 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 TADA3O75528 432 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 GPR161Q8N6U8 529 aaKnown RBP12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 VPS54Q9P1Q0 977 aa12.9□□□□□ -0.34
NUDCD1-203ENST00000519607 AFMP43652 599 aa12.9□□□□□ -0.35
NUDCD1-203ENST00000519607 PTPN21Q16825 1174 aa12.9□□□□□ -0.35
NUDCD1-203ENST00000519607 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.35
NUDCD1-203ENST00000519607 NIP7Q9Y221 180 aaKnown RBP eCLIP12.9□□□□□ -0.35
NUDCD1-203ENST00000519607 SYNRGQ9UMZ2 1314 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 NHSL1Q5SYE7 1610 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 COL14A1Q05707 1796 aaKnown RBP12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 PAGE5Q96GU1 130 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
NUDCD1-203ENST00000519607 DDAH1O94760 285 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 PNMA6AP0CW24 399 aaPredicted RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 PPP2R3AQ06190 1150 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 TOGARAM2Q6ZUX3 1019 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 USP49Q70CQ1 688 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 EPSTI1Q96J88 318 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 MRFAP1Q9Y605 127 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 LAMB2P55268 1798 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 UBE4AQ14139 1066 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 PKN1Q16512 942 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 CNGA4Q8IV77 575 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 IQUBQ8NA54 791 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 CTCFLQ8NI51 663 aaPredicted RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 SLIT2O94813 1529 aa12.88□□□□□ -0.35
NUDCD1-203ENST00000519607 A0A0G2JS52 829 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 NTSR2O95665 410 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 TUBB4BP68371 445 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 SH3RF1Q7Z6J0 888 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 WDR24Q96S15 920 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 TUBB2BQ9BVA1 445 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 ZNF804BA4D1E1 1349 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 KIF5CO60282 957 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 DPYDQ12882 1025 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 ADGRA1Q86SQ6 560 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 RIOK1Q9BRS2 568 aaKnown RBP12.87□□□□□ -0.35
NUDCD1-203ENST00000519607 ZRANB2O95218 330 aaKnown RBP eCLIP12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 SPAG1Q07617 926 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 CUL4BQ13620 913 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 ZNF174Q15697 407 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 MED15Q96RN5 788 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 PRDM1O75626 825 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 FGRP09769 529 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 GYG1P46976 350 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 STX17P56962 302 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 RBL2Q08999 1139 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 FUT2Q10981 343 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 TROAPQ12815 778 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 PTGDRQ13258 359 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 CDKAL1Q5VV42 579 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 TMTC3Q6ZXV5 915 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 RMND1Q9NWS8 449 aa12.86□□□□□ -0.35
NUDCD1-203ENST00000519607 ITIH6Q6UXX5 1313 aa12.85□□□□□ -0.35
NUDCD1-203ENST00000519607 MYH8P13535 1937 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms