RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CDK5RAP2Q96SN8 1893 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 GOLIM4O00461 696 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 EVI5O60447 810 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
PVT1-208ENST00000519481 XRCC5P13010 732 aaKnown RBP13.16□□□□□ -0.3
PVT1-208ENST00000519481 PDE6AP16499 860 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 ERVK-24P63145 666 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 CCNA1P78396 465 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 NECAB2Q7Z6G3 386 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 RIOK1Q9BRS2 568 aaKnown RBP13.16□□□□□ -0.3
PVT1-208ENST00000519481 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 ZBTB40Q9NUA8 1239 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
PVT1-208ENST00000519481 ZNF532Q9HCE3 1301 aa13.15□□□□□ -0.3
PVT1-208ENST00000519481 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
PVT1-208ENST00000519481 FXR1P51114 621 aaKnown RBP eCLIP13.15□□□□□ -0.3
PVT1-208ENST00000519481 PLEKHH3Q7Z736 793 aa13.15□□□□□ -0.3
PVT1-208ENST00000519481 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.3
PVT1-208ENST00000519481 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.15□□□□□ -0.3
PVT1-208ENST00000519481 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
PVT1-208ENST00000519481 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
PVT1-208ENST00000519481 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
PVT1-208ENST00000519481 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
PVT1-208ENST00000519481 MPHOSPH10O00566 681 aaKnown RBP13.14□□□□□ -0.31
PVT1-208ENST00000519481 SHMT1P34896 483 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 RGS2P41220 211 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 PLCD1P51178 756 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
PVT1-208ENST00000519481 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 TRIB2Q92519 343 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
PVT1-208ENST00000519481 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
PVT1-208ENST00000519481 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
PVT1-208ENST00000519481 Q3C1V9 767 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 CATSPERGQ6ZRH7 1159 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 PORCNQ9H237 461 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
PVT1-208ENST00000519481 PEX10O60683 326 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 ATP5JP18859 108 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 VCAM1P19320 739 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 GABPAQ06546 454 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 TRIM32Q13049 653 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 SEPT2Q15019 361 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 SIRT2Q8IXJ6 389 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 SDR42E1Q8WUS8 393 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 APBA2Q99767 749 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
PVT1-208ENST00000519481 DCP1AQ9NPI6 582 aaPredicted RBP13.12□□□□□ -0.31
PVT1-208ENST00000519481 ATP8A2Q9NTI2 1148 aa13.12□□□□□ -0.31
PVT1-208ENST00000519481 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
PVT1-208ENST00000519481 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 MBD4O95243 580 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 ADD2P35612 726 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 MORN1Q5T089 497 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 MAP3K21Q5TCX8 1036 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 MFSD14CQ5VZR4 134 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 TMEM179Q6ZVK1 233 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 LCORLQ8N3X6 602 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 EDC3Q96F86 508 aaKnown RBP13.11□□□□□ -0.31
PVT1-208ENST00000519481 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 ARMT1Q9H993 441 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
PVT1-208ENST00000519481 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 CACNB2Q08289 660 aaPredicted RBP13.1□□□□□ -0.31
PVT1-208ENST00000519481 COG2Q14746 738 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 DIS3LQ8TF46 1054 aaKnown RBP13.1□□□□□ -0.31
PVT1-208ENST00000519481 USP6NLQ92738 828 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 HAUS7Q99871 368 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 C11orf49Q9H6J7 331 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 OGDHLQ9ULD0 1010 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
PVT1-208ENST00000519481 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 CNMDO75829 334 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 PTPREP23469 700 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 LPAR1Q92633 364 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms