RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 WDR19Q8NEZ3 1342 aa9.53□□□□□ -0.88
PCM1-212ENST00000519253 A2ML1A8K2U0 1454 aa9.53□□□□□ -0.88
PCM1-212ENST00000519253 GTPBP6O43824 516 aaPredicted RBP9.53□□□□□ -0.88
PCM1-212ENST00000519253 MAGEA1P43355 309 aa9.53□□□□□ -0.88
PCM1-212ENST00000519253 WDR24Q96S15 920 aa9.53□□□□□ -0.88
PCM1-212ENST00000519253 ADGRG1Q9Y653 693 aa9.53□□□□□ -0.88
PCM1-212ENST00000519253 CAPN7Q9Y6W3 813 aa9.53□□□□□ -0.88
PCM1-212ENST00000519253 SHPRHQ149N8 1683 aa9.52□□□□□ -0.88
PCM1-212ENST00000519253 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.88
PCM1-212ENST00000519253 NEXMIFQ5QGS0 1516 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 TADA2BQ86TJ2 420 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 CCDC113Q9H0I3 377 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 TMEM232C9JQI7 657 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 TRHP20396 242 aaPredicted RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 SLC20A2Q08357 652 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 HNRNPLLQ8WVV9 542 aaKnown RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 GOPCQ9HD26 462 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 HYOU1Q9Y4L1 999 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 FRMPD1Q5SYB0 1578 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 RAD21O60216 631 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 UBE3CQ15386 1083 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 CCDC155Q8N6L0 562 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.52□□□□□ -0.894e-8■□□□□ 10
PCM1-212ENST00000519253 RSRC1Q96IZ7 334 aaKnown RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 ATG3Q9NT62 314 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 ATP2C2O75185 946 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 IFNAR1P17181 557 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 MCTP2Q6DN12 878 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 CABS1Q96KC9 395 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 ZKSCAN3Q9BRR0 538 aa9.52□□□□□ -0.89
PCM1-212ENST00000519253 IFIH1Q9BYX4 1025 aaKnown RBP9.52□□□□□ -0.89
PCM1-212ENST00000519253 OSBP2Q969R2 916 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 PTPREP23469 700 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 PTPN21Q16825 1174 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 CDC5LQ99459 802 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 CRNKL1Q9BZJ0 848 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 EPC1Q9H2F5 836 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 FMNL1O95466 1100 aaPredicted RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 FANCBQ8NB91 859 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 SRPRBQ9Y5M8 271 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 TBC1D8O95759 1140 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 SF3B2Q13435 895 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 SWAP70Q9UH65 585 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 ZC3H13Q5T200 1668 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 EEF1GP26641 437 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 KIAA0753Q2KHM9 967 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 CNNM4Q6P4Q7 775 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 ZNF654Q8IZM8 581 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 ACRBPQ8NEB7 543 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 SEPT11Q9NVA2 429 aaKnown RBP9.51□□□□□ -0.89
PCM1-212ENST00000519253 ERCC6L2Q5T890 1561 aa9.51□□□□□ -0.89
PCM1-212ENST00000519253 IGKV5-2P06315 115 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 CCDC172P0C7W6 258 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 LIFRP42702 1097 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 USP5P45974 858 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 EPHB4P54760 987 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 ST5P78524 1137 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 SCLT1Q96NL6 688 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 CSRNP2Q9H175 543 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 VIPAS39Q9H9C1 493 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 ABCA9Q8IUA7 1624 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 SH2B2O14492 632 aaPredicted RBP9.5□□□□□ -0.89
PCM1-212ENST00000519253 PDE4DQ08499 809 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 DPF2Q92785 391 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
PCM1-212ENST00000519253 RABEP2Q9H5N1 569 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 M0R2C6 588 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 MMP1P03956 469 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 PIK3AP1Q6ZUJ8 805 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
PCM1-212ENST00000519253 STAMQ92783 540 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 NDUFA10O95299 355 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 STOX1Q6ZVD7 989 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
PCM1-212ENST00000519253 BLZF1Q9H2G9 400 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 G3V3G9 751 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 HPDP32754 393 aaPredicted RBP9.5□□□□□ -0.89
PCM1-212ENST00000519253 PRPHP41219 470 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 PUM3Q15397 648 aaKnown RBP9.5□□□□□ -0.89
PCM1-212ENST00000519253 LRRC24Q50LG9 513 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 DCAF8Q5TAQ9 597 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 SAMD15Q9P1V8 674 aa9.5□□□□□ -0.89
PCM1-212ENST00000519253 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
PCM1-212ENST00000519253 MTMR3Q13615 1198 aa9.49□□□□□ -0.89
PCM1-212ENST00000519253 SLC9C1Q4G0N8 1177 aa9.49□□□□□ -0.89
PCM1-212ENST00000519253 CEP85LQ5SZL2 805 aa9.49□□□□□ -0.89
PCM1-212ENST00000519253 REXO1L1PQ8IX06 675 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms