RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 TMEM214Q6NUQ4 689 aaKnown RBP7.91□□□□□ -1.14
PABPC1-207ENST00000518716 FBXO46Q6PJ61 603 aaPredicted RBP7.91□□□□□ -1.14
PABPC1-207ENST00000518716 TBC1D16Q8TBP0 767 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 CELF1Q92879 486 aaKnown RBP7.91□□□□□ -1.14
PABPC1-207ENST00000518716 GCC1Q96CN9 775 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 XAGE2Q96GT9 111 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 ZCCHC2Q9C0B9 1178 aaKnown RBP7.91□□□□□ -1.14
PABPC1-207ENST00000518716 R3HDMLQ9H3Y0 253 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 GGA3Q9NZ52 723 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 PCDHGC4Q9Y5F7 938 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 SH3TC1Q8TE82 1336 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 DLG5Q8TDM6 1919 aa7.91□□□□□ -1.14
PABPC1-207ENST00000518716 PITPNM2Q9BZ72 1349 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 ECE2O60344 883 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 ANXA1P04083 346 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 NFE2L2Q16236 605 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 TMEM132AQ24JP5 1023 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 HSP90AB3PQ58FF7 597 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 MOB2Q70IA6 237 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 COPS6Q7L5N1 327 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 ISCA1Q9BUE6 129 aa7.9□□□□□ -1.14
PABPC1-207ENST00000518716 TRMT112Q9UI30 125 aaKnown RBP7.9□□□□□ -1.14
PABPC1-207ENST00000518716 CENPFP49454 3210 aa7.9□□□□□ -1.15
PABPC1-207ENST00000518716 PAPPA2Q9BXP8 1791 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-207ENST00000518716 CD33P20138 364 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 FXR1P51114 621 aaKnown RBP eCLIP7.89□□□□□ -1.15
PABPC1-207ENST00000518716 ANGEL2Q5VTE6 544 aaKnown RBP7.89□□□□□ -1.15
PABPC1-207ENST00000518716 FIGNL1Q6PIW4 674 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 AGBL3Q8NEM8 1001 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 XAGE3Q8WTP9 111 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 AVENQ9NQS1 362 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-207ENST00000518716 BABAM1Q9NWV8 329 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
PABPC1-207ENST00000518716 DDX60Q8IY21 1712 aaKnown RBP7.89□□□□□ -1.15
PABPC1-207ENST00000518716 UBE2Q2LH0YL09 131 aa7.88□□□□□ -1.15
PABPC1-207ENST00000518716 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
PABPC1-207ENST00000518716 RPS8P62241 208 aaKnown RBP7.88□□□□□ -1.15
PABPC1-207ENST00000518716 TRIM28Q13263 835 aaKnown RBP7.88□□□□□ -1.15
PABPC1-207ENST00000518716 CNGB1Q14028 1251 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-207ENST00000518716 PCGF6Q9BYE7 350 aa7.88□□□□□ -1.15
PABPC1-207ENST00000518716 KRTAP4-7Q9BYR0 210 aa7.88□□□□□ -1.15
PABPC1-207ENST00000518716 HDAC9Q9UKV0 1011 aa7.88□□□□□ -1.15
PABPC1-207ENST00000518716 RANBP2P49792 3224 aaKnown RBP7.88□□□□□ -1.15
PABPC1-207ENST00000518716 PSME4Q14997 1843 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 DCDC2BA2VCK2 349 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 FKTNO75072 461 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 MAPTP10636 758 aaKnown RBP7.87□□□□□ -1.15
PABPC1-207ENST00000518716 EIF2S2P20042 333 aaKnown RBP7.87□□□□□ -1.15
PABPC1-207ENST00000518716 ATP4AP20648 1035 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 LDLRAD1Q5T700 205 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 RHBDD1Q8TEB9 315 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 FAM89AQ96GI7 184 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 EYA3Q99504 573 aa7.87□□□□□ -1.15
PABPC1-207ENST00000518716 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
PABPC1-207ENST00000518716 TNP2Q05952 138 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 PRRT3Q5FWE3 981 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 PRAMEF18Q5VWM3 479 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 INTS3Q68E01 1043 aaKnown RBP7.86□□□□□ -1.15
PABPC1-207ENST00000518716 PLBD2Q8NHP8 589 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 FAM117AQ9C073 453 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 ZC3H12CQ9C0D7 883 aaKnown RBP7.86□□□□□ -1.15
PABPC1-207ENST00000518716 MYOZ2Q9NPC6 264 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 TSPYL4Q9UJ04 414 aa7.86□□□□□ -1.15
PABPC1-207ENST00000518716 SCAF8Q9UPN6 1271 aaKnown RBP7.86□□□□□ -1.15
PABPC1-207ENST00000518716 WTIPA6NIX2 430 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-207ENST00000518716 CHL1O00533 1208 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 CAP1Q01518 475 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 PTPN12Q05209 780 aaKnown RBP7.85□□□□□ -1.15
PABPC1-207ENST00000518716 AIMP1Q12904 312 aaKnown RBP7.85□□□□□ -1.15
PABPC1-207ENST00000518716 COL9A3Q14050 684 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-207ENST00000518716 NBPF9Q3BBW0 867 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 ZNF468Q5VIY5 522 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-207ENST00000518716 OTOP1Q7RTM1 612 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 NLRP8Q86W28 1048 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 ARMC5Q96C12 935 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 ZBED3Q96IU2 234 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-207ENST00000518716 SEC31BQ9NQW1 1179 aa7.85□□□□□ -1.15
PABPC1-207ENST00000518716 RBBP6Q7Z6E9 1792 aaKnown RBP7.84□□□□□ -1.15
PABPC1-207ENST00000518716 SPDYE3A6NKU9 549 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 WNT10BO00744 389 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 IRS4O14654 1257 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-207ENST00000518716 STAU1O95793 577 aaKnown RBP7.84□□□□□ -1.15
PABPC1-207ENST00000518716 PLA2G4AP47712 749 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 SREBF2Q12772 1141 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 MAP3K11Q16584 847 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 KRT24Q2M2I5 525 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 TBC1D9Q6ZT07 1266 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 ZNF428Q96B54 188 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 CHPF2Q9P2E5 772 aa7.84□□□□□ -1.15
PABPC1-207ENST00000518716 ZNF646O15015 1829 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-207ENST00000518716 USP17L3A6NCW0 530 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 USP17L4A6NCW7 530 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 UFL1O94874 794 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 RFC5P40937 340 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 LCE1DQ5T752 114 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 USP17L1Q7RTZ2 530 aa7.83□□□□□ -1.16
PABPC1-207ENST00000518716 ZBTB38Q8NAP3 1195 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms