RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LOC285556D6RIA3 1793 aa26.18■■□□□ 1.78
VEGFA-217ENST00000518538 GPR25O00155 361 aa26.18■■□□□ 1.78
VEGFA-217ENST00000518538 RASA1P20936 1047 aa26.18■■□□□ 1.78
VEGFA-217ENST00000518538 ANAPC4Q9UJX5 808 aa26.18■■□□□ 1.78
VEGFA-217ENST00000518538 PDE4BQ07343 736 aa26.17■■□□□ 1.78
VEGFA-217ENST00000518538 FEZ1Q99689 392 aa26.17■■□□□ 1.78
VEGFA-217ENST00000518538 TMOD4Q9NZQ9 345 aa26.17■■□□□ 1.78
VEGFA-217ENST00000518538 PARK7Q99497 189 aaKnown RBP26.16■■□□□ 1.78
VEGFA-217ENST00000518538 DSCC1Q9BVC3 393 aa26.16■■□□□ 1.78
VEGFA-217ENST00000518538 KIAA1683Q9H0B3 1180 aa26.16■■□□□ 1.78
VEGFA-217ENST00000518538 IL25Q9H293 177 aa26.16■■□□□ 1.78
VEGFA-217ENST00000518538 DGKZQ13574 1117 aa26.15■■□□□ 1.78
VEGFA-217ENST00000518538 TREML2Q5T2D2 321 aa26.15■■□□□ 1.78
VEGFA-217ENST00000518538 COL13A1Q5TAT6 717 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-217ENST00000518538 USP17L2Q6R6M4 530 aa26.15■■□□□ 1.78
VEGFA-217ENST00000518538 ZNF444Q8N0Y2 327 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-217ENST00000518538 ACER1Q8TDN7 264 aa26.15■■□□□ 1.78
VEGFA-217ENST00000518538 ZNF296Q8WUU4 475 aaPredicted RBP26.15■■□□□ 1.78
VEGFA-217ENST00000518538 TLR2O60603 784 aa26.14■■□□□ 1.78
VEGFA-217ENST00000518538 PRDM1O75626 825 aa26.14■■□□□ 1.78
VEGFA-217ENST00000518538 USP14P54578 494 aa26.14■■□□□ 1.78
VEGFA-217ENST00000518538 ICA1Q05084 483 aa26.14■■□□□ 1.78
VEGFA-217ENST00000518538 CTDSPL2Q05D32 466 aa26.14■■□□□ 1.78
VEGFA-217ENST00000518538 C12orf42Q96LP6 360 aa26.14■■□□□ 1.78
VEGFA-217ENST00000518538 FKTNO75072 461 aa26.13■■□□□ 1.77
VEGFA-217ENST00000518538 PABPC4Q13310 644 aaKnown RBP eCLIP26.13■■□□□ 1.776e-13■■■■■ 112.3
VEGFA-217ENST00000518538 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.13■■□□□ 1.77
VEGFA-217ENST00000518538 KANSL2Q9H9L4 492 aa26.13■■□□□ 1.77
VEGFA-217ENST00000518538 EMILIN3Q9NT22 766 aa26.13■■□□□ 1.77
VEGFA-217ENST00000518538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.13■■□□□ 1.772e-6■□□□□ 9
VEGFA-217ENST00000518538 ADGRA2Q96PE1 1338 aa26.13■■□□□ 1.77
VEGFA-217ENST00000518538 GREB1LQ9C091 1923 aaPredicted RBP26.12■■□□□ 1.77
VEGFA-217ENST00000518538 CLEC10AQ8IUN9 316 aa26.12■■□□□ 1.77
VEGFA-217ENST00000518538 ARHGEF10LQ9HCE6 1279 aa26.12■■□□□ 1.77
VEGFA-217ENST00000518538 PNMA3Q9UL41 463 aa26.12■■□□□ 1.77
VEGFA-217ENST00000518538 A0A1W2PRG0 241 aa26.11■■□□□ 1.77
VEGFA-217ENST00000518538 SGSM2O43147 1006 aa26.11■■□□□ 1.77
VEGFA-217ENST00000518538 CYP2C8P10632 490 aa26.11■■□□□ 1.77
VEGFA-217ENST00000518538 ZYXQ15942 572 aaKnown RBP26.11■■□□□ 1.77
VEGFA-217ENST00000518538 SIAH1Q8IUQ4 282 aa26.11■■□□□ 1.77
VEGFA-217ENST00000518538 SH2D4AQ9H788 454 aa26.11■■□□□ 1.77
VEGFA-217ENST00000518538 CASP8AP2Q9UKL3 1982 aa26.11■■□□□ 1.77
VEGFA-217ENST00000518538 PLIN4Q96Q06 1357 aa26.1■■□□□ 1.77
VEGFA-217ENST00000518538 FGRP09769 529 aa26.1■■□□□ 1.77
VEGFA-217ENST00000518538 HOXA7P31268 230 aaPredicted RBP26.1■■□□□ 1.77
VEGFA-217ENST00000518538 TMX2Q9Y320 296 aa26.1■■□□□ 1.77
VEGFA-217ENST00000518538 ORC4O43929 436 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 EEF2P13639 858 aaKnown RBP26.09■■□□□ 1.77
VEGFA-217ENST00000518538 OSBPP22059 807 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 HAND2P61296 217 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 SP3Q02447 781 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 C17orf99Q6UX52 265 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 CTNNA3Q9UI47 895 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 TACC3Q9Y6A5 838 aa26.09■■□□□ 1.77
VEGFA-217ENST00000518538 IGKV6D-41A0A0C4DH26 115 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 ZNF213O14771 459 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 TSPY3P0CV98 308 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 TSPY8P0CW00 308 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 PCP11498 1178 aaKnown RBP26.08■■□□□ 1.77
VEGFA-217ENST00000518538 NEDD1Q8NHV4 660 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 SMCR8Q8TEV9 937 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-217ENST00000518538 NBPF3Q9H094 633 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 ASCC2Q9H1I8 757 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-217ENST00000518538 INCENPQ9NQS7 918 aa26.08■■□□□ 1.77
VEGFA-217ENST00000518538 VCAM1P19320 739 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 TFAP4Q01664 338 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 FAM47AQ5JRC9 791 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 STAG1Q8WVM7 1258 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 ERO1AQ96HE7 468 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 NYAP2Q9P242 653 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 CPA4Q9UI42 421 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 LAMA4Q16363 1823 aa26.07■■□□□ 1.76
VEGFA-217ENST00000518538 IRX3P78415 501 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-217ENST00000518538 ATP2B2Q01814 1243 aa26.06■■□□□ 1.76
VEGFA-217ENST00000518538 IMMTQ16891 758 aaKnown RBP26.06■■□□□ 1.76
VEGFA-217ENST00000518538 AKNAD1Q5T1N1 836 aa26.06■■□□□ 1.76
VEGFA-217ENST00000518538 TBC1D10CQ8IV04 446 aa26.06■■□□□ 1.76
VEGFA-217ENST00000518538 RNF41Q9H4P4 317 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-217ENST00000518538 TSPY2A6NKD2 308 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 BCRP11274 1271 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 MFSD6Q6ZSS7 791 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 LPAR1Q92633 364 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 CEP95Q96GE4 821 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 ESYT1Q9BSJ8 1104 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 VCPKMTQ9H867 229 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 TOMM22Q9NS69 142 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 MTMR4Q9NYA4 1195 aa26.05■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L15C9J2P7 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L13C9JLJ4 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L11C9JVI0 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L18D6R9N7 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L22D6RA61 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L17D6RBQ6 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L19D6RCP7 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L20D6RJB6 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 RANBP6O60518 1105 aaKnown RBP26.04■■□□□ 1.76
VEGFA-217ENST00000518538 PTH1RQ03431 593 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 USP17L24Q0WX57 530 aa26.04■■□□□ 1.76
VEGFA-217ENST00000518538 CTU1Q7Z7A3 348 aaKnown RBP26.04■■□□□ 1.76
VEGFA-217ENST00000518538 CDC45O75419 566 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms