RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ZC3H7AQ8IWR0 971 aaKnown RBP0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 EPS8L1Q8TE68 723 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZNF592Q92610 1267 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZNF778Q96MU6 729 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 ADOQ96SZ5 270 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 FOXQ1Q9C009 403 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 MTMR4Q9NYA4 1195 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 CHMP3Q9Y3E7 222 aa0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 COL3A1P02461 1466 aaPredicted RBP0.34□□□□□ -2.36
SNORA40.16-201ENST00000517238 TMEM229AB2RXF0 380 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 RHOBTB3O94955 611 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 BMP15O95972 392 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 GCP02774 474 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZGLP1P0C6A0 271 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 RFX1P22670 979 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 PROZP22891 400 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 YBX1P67809 324 aaKnown RBP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 SF3B4Q15427 424 aaKnown RBP eCLIP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 RGL3Q3MIN7 710 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 OXLD1Q5BKU9 147 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 LCE3CQ5T5A8 94 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 IER5Q5VY09 327 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 HEATR6Q6AI08 1181 aaKnown RBP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 NPNTQ6UXI9 565 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 SMYD4Q8IYR2 804 aaPredicted RBP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 Q8TCH9 128 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 ADAMTS17Q8TE56 1095 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 CACTINQ8WUQ7 758 aaKnown RBP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 ARHGEF1Q92888 912 aaKnown RBP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 UBE2FQ969M7 185 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 RGMAQ96B86 450 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 SIRT1Q96EB6 747 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 ARXQ96QS3 562 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 POP1Q99575 1024 aaKnown RBP0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 BEGAINQ9BUH8 593 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 C1QTNF7Q9BXJ2 289 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 PBX4Q9BYU1 374 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 C11orf16Q9NQ32 467 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 NTMQ9P121 344 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 DOLKQ9UPQ8 538 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 MMP24Q9Y5R2 645 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 COX11Q9Y6N1 276 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 SPATA31A6Q5VVP1 1343 aa0.33□□□□□ -2.36
SNORA40.16-201ENST00000517238 TGFBR3LH3BV60 316 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 BACH1O14867 736 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 IRF6O14896 467 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 FBXO45P0C2W1 286 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 IGFBP6P24592 240 aaPredicted RBP0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 E2F1Q01094 437 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 DLX2Q07687 328 aaPredicted RBP0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 HYAL2Q12891 473 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 IKBKEQ14164 716 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 VPS72Q15906 364 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 HP1BP3Q5SSJ5 553 aaPredicted RBP0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 USPL1Q5W0Q7 1092 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 FAM214BQ7L5A3 538 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 TMPRSS12Q86WS5 348 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 SPPL2CQ8IUH8 684 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 C1orf210Q8IVY1 113 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 METTL14Q9HCE5 456 aaKnown RBP0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 ZSWIM5Q9P217 1185 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 SLAIN2Q9P270 581 aa0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 KLF2Q9Y5W3 355 aaPredicted RBP0.32□□□□□ -2.36
SNORA40.16-201ENST00000517238 SOX1O00570 391 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 RNGTTO60942 597 aaKnown RBP0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 XYLBO75191 536 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 INPP5BP32019 993 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 KRT2P35908 639 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 IDH3AP50213 366 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 ARSDP51689 593 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 HTRA3P83110 453 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 FOXO4P98177 505 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 GSTM4Q03013 218 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 CHRNEQ04844 493 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 MIDNQ504T8 468 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 COL13A1Q5TAT6 717 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 GPRIN1Q7Z2K8 1008 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 THAP5Q7Z6K1 395 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 RPUSD2Q8IZ73 545 aaKnown RBP0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 KRT78Q8N1N4 520 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 DHX38Q92620 1227 aaKnown RBP0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 JADE2Q9NQC1 790 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 PRDM5Q9NQX1 630 aaPredicted RBP0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 LIMD1Q9UGP4 676 aa0.31□□□□□ -2.36
SNORA40.16-201ENST00000517238 AHNAKQ09666 5890 aaKnown RBP0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 MROH6A6NGR9 719 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 CBFA2T3O75081 653 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 ESR1P03372 595 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 IGKV2-30P06310 120 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 HIRAP54198 1017 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 TMEM62Q0P6H9 643 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 LCE3EQ5T5B0 92 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 HIST2H2BCQ6DN03 193 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 HDXQ7Z353 690 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 PLEKHH3Q7Z736 793 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 CREG2Q8IUH2 290 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 MFSD4AQ8N468 514 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 SYTL4Q96C24 671 aaPredicted RBP0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 R3HDMLQ9H3Y0 253 aa0.3□□□□□ -2.36
SNORA40.16-201ENST00000517238 RSAD1Q9HA92 442 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms