RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 PEX10O60683 326 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 VCPP55072 806 aaKnown RBP7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 ERVK-24P63145 666 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 FAM47AQ5JRC9 791 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 RNF180Q86T96 592 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CCDC84Q86UT8 332 aaPredicted RBP7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CCDC191Q8NCU4 936 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 ZDHHC15Q96MV8 337 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 POP1Q99575 1024 aaKnown RBP7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 TXNRD2Q9NNW7 524 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CWC25Q9NXE8 425 aaPredicted RBP7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 LOC285556D6RIA3 1793 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NAV2Q8IVL1 2488 aa7.32□□□□□ -1.24
SCARNA21.2-201ENST00000516600 PHIPQ8WWQ0 1821 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 MROH7Q68CQ1 1323 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 H3BQ06 376 aaPredicted RBP7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 TAF5LO75529 589 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 AVPR2P30518 371 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NUBP1P53384 320 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 HMGCS2P54868 508 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 DOCK1Q14185 1865 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NCBP3Q53F19 620 aaKnown RBP7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 WDR78Q5VTH9 848 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 APOBEC3HQ6NTF7 200 aaKnown RBP7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 FRMD5Q7Z6J6 570 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 PAGR1Q9BTK6 254 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 XPNPEP3Q9NQH7 507 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 STARD7Q9NQZ5 370 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 LMCD1Q9NZU5 365 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 COL4A4P53420 1690 aaPredicted RBP7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 ASH1LQ9NR48 2969 aaKnown RBP7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 MYH3P11055 1940 aa7.31□□□□□ -1.24
SCARNA21.2-201ENST00000516600 SLC15A5A6NIM6 579 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 LPXNO60711 386 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CTNND1O60716 968 aaKnown RBP7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 HERVK_113P62684 666 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 TAP1Q03518 808 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 GOLGA2Q08379 1002 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 SPP2Q13103 211 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 RNF135Q8IUD6 432 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NUP133Q8WUM0 1156 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 MYD88Q99836 296 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NUDCQ9Y266 331 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NDUFB9Q9Y6M9 179 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 IVNS1ABPQ9Y6Y0 642 aa7.3□□□□□ -1.24
SCARNA21.2-201ENST00000516600 SOBPA7XYQ1 873 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 GALR2O43603 387 aaPredicted RBP7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NEFMP07197 916 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 HOXC6P09630 235 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 RARBP10826 455 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 ITGA6P23229 1130 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CYP2C18P33260 490 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CCNA1P78396 465 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 GRIK5Q16478 980 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 Q3C1V9 767 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 KIAA2013Q8IYS2 634 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 ZNF280CQ8ND82 737 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NEK9Q8TD19 979 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 GDPD5Q8WTR4 605 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 RBPJLQ9UBG7 517 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
SCARNA21.2-201ENST00000516600 MAST3O60307 1309 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 PGK1P00558 417 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 SLC4A2P04920 1241 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 PTPREP23469 700 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 DMWDQ09019 674 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NFIAQ12857 509 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NFE2L2Q16236 605 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 HDGFL1Q5TGJ6 251 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 EP400NLQ6ZTU2 488 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 NPLOC4Q8TAT6 608 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 TBC1D22AQ8WUA7 517 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 MRIQ9BWK5 157 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 HYPKQ9NX55 129 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 DLL3Q9NYJ7 618 aa7.28□□□□□ -1.24
SCARNA21.2-201ENST00000516600 DLG5Q8TDM6 1919 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 KIF28PB7ZC32 967 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 TLR3O15455 904 aaKnown RBP7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 HIBADHP31937 336 aaKnown RBP7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 ZXDAP98168 799 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 CHAF1AQ13111 956 aaPredicted RBP7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 CC2D1BQ5T0F9 858 aaKnown RBP7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 OLFML2BQ68BL8 750 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 DPP9Q86TI2 863 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 ZSCAN29Q8IWY8 852 aaPredicted RBP7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 RPUSD2Q8IZ73 545 aaKnown RBP7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 TBC1D2Q9BYX2 928 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 TMOD4Q9NZQ9 345 aa7.27□□□□□ -1.25
SCARNA21.2-201ENST00000516600 A0A1B0GUL6 1792 aa7.26□□□□□ -1.25
SCARNA21.2-201ENST00000516600 FRAT2O75474 233 aaPredicted RBP7.26□□□□□ -1.25
SCARNA21.2-201ENST00000516600 ARHGEF15O94989 841 aa7.26□□□□□ -1.25
SCARNA21.2-201ENST00000516600 HOXA7P31268 230 aaPredicted RBP7.26□□□□□ -1.25
SCARNA21.2-201ENST00000516600 GYG1P46976 350 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms