RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.26
SCARNA16.1-201ENST00000516133 EMILIN3Q9NT22 766 aa13.4□□□□□ -0.26
SCARNA16.1-201ENST00000516133 PTPRFP10586 1907 aa13.4□□□□□ -0.26
SCARNA16.1-201ENST00000516133 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 MINDY4BA8MYZ0 360 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 FCGRTP55899 365 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 CAP1Q01518 475 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ACER1Q8TDN7 264 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 TRIM47Q96LD4 638 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 C12orf42Q96LP6 360 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 P2RX7Q99572 595 aaKnown RBP13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 MKNK2Q9HBH9 465 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 HELLSQ9NRZ9 838 aa13.39□□□□□ -0.27
SCARNA16.1-201ENST00000516133 NAV1Q8NEY1 1877 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 FAM110CQ1W6H9 321 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ANKRD13CQ8N6S4 541 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SH2D4AQ9H788 454 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ARHGEF10LQ9HCE6 1279 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
SCARNA16.1-201ENST00000516133 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SMIM22K7EJ46 135 aa13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 AKR1B1P15121 316 aa13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RGS19P49795 217 aa13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ZYXQ15942 572 aaKnown RBP13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 MCMDC2Q4G0Z9 681 aa13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 NAPBQ9H115 298 aa13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 HTTP42858 3142 aa13.37□□□□□ -0.27
SCARNA16.1-201ENST00000516133 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 A0A1W2PRG0 241 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 TNPO2O14787 897 aaKnown RBP13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 VCAM1P19320 739 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 CTGFP29279 349 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 HERVK_113P62684 666 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ICA1Q05084 483 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 PDE4BQ07343 736 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 CATSPERGQ6ZRH7 1159 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 GPRC5AQ8NFJ5 357 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 LPAR1Q92633 364 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 TMX2Q9Y320 296 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 PTCH2Q9Y6C5 1203 aa13.36□□□□□ -0.27
SCARNA16.1-201ENST00000516133 LOC285556D6RIA3 1793 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ROBO3Q96MS0 1386 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 HIP1O00291 1037 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 ALX1Q15699 326 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RAET1EQ8TD07 263 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 COA7Q96BR5 231 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 FAM227BQ96M60 508 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
SCARNA16.1-201ENST00000516133 EEF2P13639 858 aaKnown RBP13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 SDSP20132 328 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RASA1P20936 1047 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 PPARAQ07869 468 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 COG2Q14746 738 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RBPJLQ9UBG7 517 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 CENPFP49454 3210 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
SCARNA16.1-201ENST00000516133 A0A0D9SFI3 127 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 FLT3LGP49771 235 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 SOX10P56693 466 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ATP2B2Q01814 1243 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 PRKCZQ05513 592 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 LBX2Q6XYB7 198 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 STK11IPQ8N1F8 1099 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 ZNF333Q96JL9 665 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 GOPCQ9HD26 462 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 DIAPH3Q9NSV4 1193 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 NYAP2Q9P242 653 aa13.33□□□□□ -0.28
SCARNA16.1-201ENST00000516133 FOXP2O15409 715 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms