RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	MCM9	Q9NXL9	1143 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ORC3	Q9UBD5	711 aa	Predicted RBP	5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SLC12A7	Q9Y666	1083 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MYH13	Q9UKX3	1938 aa		5.24	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ELP1	O95163	1332 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TNKS	O95271	1327 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	STK36	Q9NRP7	1315 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	EP400	Q96L91	3159 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CCDC196	A0A1B0GTZ2	297 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RANBP6	O60518	1105 aa	Known RBP	5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PRDM1	O75626	825 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FMNL1	O95466	1100 aa	Predicted RBP	5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NCL	P19338	710 aa	Known RBP	5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RXRA	P19793	462 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KCNA3	P22001	575 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZNF445	P59923	1031 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	UBE2H	P62256	183 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PDE4B	Q07343	736 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KIAA2012	Q0VF49	1180 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DACT2	Q5SW24	774 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	XP32	Q5T750	250 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	STRIP1	Q5VSL9	837 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ATL3	Q6DD88	541 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FAM173B	Q6P4H8	233 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	HHIPL2	Q6UWX4	724 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	NBPF11	Q86T75	865 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TTC6	Q86TZ1	520 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MICU3	Q86XE3	530 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	IQCA1	Q86XH1	822 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RAB11FIP4	Q86YS3	637 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	AMOTL1	Q8IY63	956 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TEX11	Q8IYF3	940 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZNF654	Q8IZM8	581 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	STK11IP	Q8N1F8	1099 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ENAH	Q8N8S7	591 aa	Predicted RBP	5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FANCB	Q8NB91	859 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SUPT20H	Q8NEM7	779 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FBXO18	Q8NFZ0	1043 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TGFBRAP1	Q8WUH2	860 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ANKS1A	Q92625	1134 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	C8orf76	Q96K31	380 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	UBAC1	Q9BSL1	405 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MYL10	Q9BUA6	226 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GDPD2	Q9HCC8	539 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TCP11L1	Q9NUJ3	509 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ISY1	Q9ULR0	285 aa	Known RBP	5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DAGLA	Q9Y4D2	1042 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CCDC88A	Q3V6T2	1871 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FLT1	P17948	1338 aa		5.23	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GOLGA6L3	A6NEY3	463 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TSPY2	A6NKD2	308 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FIBP	O43427	364 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	WIPF1	O43516	503 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ECE2	O60344	883 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PPFIA3	O75145	1194 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DDAH1	O94760	285 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	POLR3D	P05423	398 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CALM1	P0DP23	149 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CALM2	P0DP24	149 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CALM3	P0DP25	149 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	IARS	P41252	1262 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PLCD1	P51178	756 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	HDLBP	Q00341	1268 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TFAP4	Q01664	338 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	SSRP1	Q08945	709 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TROAP	Q12815	778 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RTN1	Q16799	776 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZSCAN23	Q3MJ62	389 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CCDC178	Q5BJE1	867 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	FAM47A	Q5JRC9	791 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PPP1R15B	Q5SWA1	713 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	IFIT1B	Q5T764	474 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	L1TD1	Q5T7N2	865 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RCSD1	Q6JBY9	416 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CAVIN1	Q6NZI2	390 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	C16orf86	Q6ZW13	317 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CATIP	Q7Z7H3	387 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	GAS2L3	Q86XJ1	694 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DGKH	Q86XP1	1220 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MAPKAPK5	Q8IW41	473 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CCDC144CP	Q8IYA2	1237 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TTLL6	Q8N841	843 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	LEO1	Q8WVC0	666 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	WASF1	Q92558	559 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PHKB	Q93100	1093 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DYNLL2	Q96FJ2	89 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZNF396	Q96N95	335 aa	Predicted RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	PSMD1	Q99460	953 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MAP3K14	Q99558	947 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ALG1	Q9BT22	464 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	MXD3	Q9BW11	206 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	VPS33B	Q9H267	617 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	DBNDD1	Q9H9R9	158 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	ZNF287	Q9HBT7	754 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	KCNQ5	Q9NR82	932 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	IL17RB	Q9NRM6	502 aa		5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	RBM28	Q9NW13	759 aa	Known RBP	5.22	□□□□□ -1.57
ATP2C1-223	ENST00000515854	TMEM63C	Q9P1W3	806 aa		5.22	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms