RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
ATR-209ENST00000515810 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
ATR-209ENST00000515810 C9IYK1 514 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 RGS13O14921 159 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 EGFLAMQ63HQ2 1017 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 ARMCX6Q7L4S7 300 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 PPP1R13LQ8WUF5 828 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 FBLIM1Q8WUP2 373 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 ZNF512BQ96KM6 892 aaPredicted RBP9.33□□□□□ -0.92
ATR-209ENST00000515810 DAGLAQ9Y4D2 1042 aa9.33□□□□□ -0.92
ATR-209ENST00000515810 KRBA1A5PL33 1030 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 TP53P04637 393 aaPredicted RBP9.32□□□□□ -0.92
ATR-209ENST00000515810 NFICP08651 508 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 CAP2P40123 477 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 RASSF7Q02833 373 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 GNPTABQ3T906 1256 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 SH3TC2Q8TF17 1288 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
ATR-209ENST00000515810 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 CCDC74BQ96LY2 380 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 FOXQ1Q9C009 403 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 SEMA6CQ9H3T2 930 aa9.32□□□□□ -0.92
ATR-209ENST00000515810 SART1O43290 800 aaKnown RBP9.31□□□□□ -0.92
ATR-209ENST00000515810 MBTPS1Q14703 1052 aa9.31□□□□□ -0.92
ATR-209ENST00000515810 MTERF2Q49AM1 385 aa9.31□□□□□ -0.92
ATR-209ENST00000515810 ALYREFQ86V81 257 aaKnown RBP9.31□□□□□ -0.92
ATR-209ENST00000515810 CYB5D2Q8WUJ1 264 aa9.31□□□□□ -0.92
ATR-209ENST00000515810 MEGF10Q96KG7 1140 aa9.31□□□□□ -0.92
ATR-209ENST00000515810 PHAXQ9H814 394 aaKnown RBP9.31□□□□□ -0.92
ATR-209ENST00000515810 PCOLCE2Q9UKZ9 415 aa9.31□□□□□ -0.92
ATR-209ENST00000515810 SLC12A7Q9Y666 1083 aa9.31□□□□□ -0.92
ATR-209ENST00000515810 COL17A1Q9UMD9 1497 aaPredicted RBP9.3□□□□□ -0.92
ATR-209ENST00000515810 SBNO2Q9Y2G9 1366 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 GBP1P32455 592 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 USP11P51784 963 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 SLC7A5Q01650 507 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 IFRD2Q12894 506 aaPredicted RBP9.3□□□□□ -0.92
ATR-209ENST00000515810 ARMC10Q8N2F6 343 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 KCT2Q8NC54 265 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 PSMG3-AS1Q96PY0 264 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 ZMYM5Q9UJ78 669 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 LEMD3Q9Y2U8 911 aa9.3□□□□□ -0.92
ATR-209ENST00000515810 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.29□□□□□ -0.92
ATR-209ENST00000515810 ESYT3A0FGR9 886 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 GAS2O43903 313 aaKnown RBP9.29□□□□□ -0.92
ATR-209ENST00000515810 LRIG2O94898 1065 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 SLITRK5O94991 958 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 PMS1P54277 932 aaKnown RBP9.29□□□□□ -0.92
ATR-209ENST00000515810 SQSTM1Q13501 440 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 ADGRE1Q14246 886 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 DNAJB8Q8NHS0 232 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 LGR4Q9BXB1 951 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 SUCOQ9UBS9 1254 aaKnown RBP9.29□□□□□ -0.92
ATR-209ENST00000515810 SUSD2Q9UGT4 822 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.29□□□□□ -0.92
ATR-209ENST00000515810 CNTNAP4Q9C0A0 1308 aa9.29□□□□□ -0.92
ATR-209ENST00000515810 C9orf172C9J069 976 aa9.28□□□□□ -0.92
ATR-209ENST00000515810 SUSD5O60279 629 aa9.28□□□□□ -0.92
ATR-209ENST00000515810 CDK5R2Q13319 367 aa9.28□□□□□ -0.92
ATR-209ENST00000515810 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
ATR-209ENST00000515810 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.28□□□□□ -0.92
ATR-209ENST00000515810 CEP41Q9BYV8 373 aa9.28□□□□□ -0.92
ATR-209ENST00000515810 KDM2BQ8NHM5 1336 aa9.28□□□□□ -0.92
ATR-209ENST00000515810 APBA3O96018 575 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 BMP3P12645 472 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 CCNFP41002 786 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 CHMP4BP1P59074 171 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 NCAPHQ15003 741 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 SLC10A6Q3KNW5 377 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 SEZ6L2Q6UXD5 910 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 CDH24Q86UP0 819 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
ATR-209ENST00000515810 EZH1Q92800 747 aaPredicted RBP9.27□□□□□ -0.93
ATR-209ENST00000515810 MIPEPQ99797 713 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
ATR-209ENST00000515810 CLEC3AO75596 197 aa9.26□□□□□ -0.93
ATR-209ENST00000515810 NRG1Q02297 640 aaPredicted RBP9.26□□□□□ -0.93
ATR-209ENST00000515810 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
ATR-209ENST00000515810 DCAF15Q66K64 600 aa9.26□□□□□ -0.93
ATR-209ENST00000515810 EEPD1Q7L9B9 569 aa9.26□□□□□ -0.93
ATR-209ENST00000515810 ST13P5Q8NFI4 369 aaPredicted RBP9.26□□□□□ -0.93
ATR-209ENST00000515810 VWCEQ96DN2 955 aa9.26□□□□□ -0.93
ATR-209ENST00000515810 C1GALT1Q9NS00 363 aa9.26□□□□□ -0.93
ATR-209ENST00000515810 CEP131Q9UPN4 1083 aa9.26□□□□□ -0.93
ATR-209ENST00000515810 ENPP3O14638 875 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 CBFA2T2O43439 604 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 GDF11O95390 407 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 ITGB2P05107 769 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 EPHX1P07099 455 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 FAM153BP0C7A2 387 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 MAP4P27816 1152 aaKnown RBP9.25□□□□□ -0.93
ATR-209ENST00000515810 CHRNA4P43681 627 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 LETMD1Q6P1Q0 360 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 CD163Q86VB7 1156 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 TMEM151AQ8N4L1 468 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 MFSD2AQ8NA29 543 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 UTP4Q969X6 686 aaKnown RBP9.25□□□□□ -0.93
ATR-209ENST00000515810 DHRS1Q96LJ7 313 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 MYRFLQ96LU7 910 aa9.25□□□□□ -0.93
ATR-209ENST00000515810 ANKRD62A6NC57 917 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms